非严重再生障碍性贫血和骨髓增生异常综合征-发育不良血浆分离外泌体的蛋白质组学分析。

IF 3.6 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
Dandi He, Dingding Li, Ming Liu, Li Lin, Mingjie Gao, Heran Li, Yuting Zhao, Qi Zhao, Xin Yue, Fei Tian, Jinhuan Wang
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引用次数: 0

摘要

非严重再生障碍性贫血(NSAA)和骨髓增生异常综合征-发育不良(MDS-h)是常见的血液系统疾病。他们相似的临床症状和实验室检查使诊断具有挑战性。为了辨别它们的差异并促进诊断,我们利用了血液外泌体并采用了定量蛋白质组学方法。从20例NSAA患者、10例MDS-h患者和10例健康人的外周血中提取外泌体,进行鉴定,并采用液相色谱-串联质谱(LC-MS/MS)对外泌体进行分析。亚细胞定位、GO、KEGG和Mfuzz分析确定了差异表达蛋白(DEPs)的特征。候选蛋白通过平行反应监测(PRM)分析验证,使用上述受试者的血浆外泌体样本。LC-MS/MS在MDS-h中鉴定出62个DEPs,在NSAA与MDS-h (C/M)比较中鉴定出68个DEPs。DEPs的功能富集分析表明,它们参与MDS-h的脂质代谢调节,而C/M中的DEPs则与信号转导和免疫调节有关。Mfuzz分析在三个样本组之间产生了四个具有显著差异的大聚类。PRM分析鉴定出C4A、APOA1和serinf2,并通过ELISA验证了它们在NSAA、MDS-h和健康受试者中的表达。在此,我们对NSAA和MDS-h患者的外泌体蛋白质组谱进行了表征,筛选并验证了有价值的候选蛋白质。这项工作为NSAA和MDS-h的鉴别诊断和机制研究提供了依据。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Proteome Profiling of Exosome Isolated from Non-Severe Aplastic Anemia and Myelodysplastic Syndrome-Hypoplastic Plasma.

Non-severe aplastic anemia (NSAA) and myelodysplastic syndrome-hypoplastic (MDS-h) are common hematological disorders. Their similar clinical symptoms and lab investigations make diagnosis challenging. To discern their differences and facilitate diagnosis, we utilized blood exosomes and employed a quantitative proteomics approach. Exosomes were extracted, identified from peripheral blood plasma of 20 NSAA, 10 MDS-h patients, and 10 healthy subjects, and then analyzed by liquid chromatography-tandem mass spectrometry (LC-MS/MS). Subcellular localization, GO, KEGG, and Mfuzz analyses determined differentially expressed protein (DEPs) features. Candidate proteins were validated via parallel reaction monitoring (PRM) analysis using plasma exosome samples from the above-mentioned subjects. LC-MS/MS identified 62 DEPs in MDS-h and 68 in the NSAA versus MDS-h (C/M) comparison. Functional enrichment analysis of DEPs indicated their involvement in lipid metabolism regulation in MDS-h, while those in C/M were related to signal transduction and immunomodulation. Mfuzz analysis yielded four large clusters with significant differences among the three sample groups. PRM analysis identified C4A, APOA1, and SERPINF2, with their expression validated by ELISA in NSAA, MDS-h, and healthy subjects. Herein, we characterized exosomal proteome profiles of NSAA and MDS-h patients, screening, and validating valuable candidate proteins. This work informs the differential diagnosis and mechanistic research of the NSAA and MDS-h.

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来源期刊
Journal of Proteome Research
Journal of Proteome Research 生物-生化研究方法
CiteScore
9.00
自引率
4.50%
发文量
251
审稿时长
3 months
期刊介绍: Journal of Proteome Research publishes content encompassing all aspects of global protein analysis and function, including the dynamic aspects of genomics, spatio-temporal proteomics, metabonomics and metabolomics, clinical and agricultural proteomics, as well as advances in methodology including bioinformatics. The theme and emphasis is on a multidisciplinary approach to the life sciences through the synergy between the different types of "omics".
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