通过脑脊液蛋白质组学鉴定儿童烟雾病发病机制和预后相关的生物标志物

IF 4.3 2区 医学 Q1 CLINICAL NEUROLOGY
Youngbo Shim, Seung Ah Choi, Kisoon Dan, Eun Jung Koh, Saehim Ha, Ji Hoon Phi, Joo Whan Kim, Dohyun Han, Seung-Ki Kim
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引用次数: 0

摘要

开发具有成本效益的、无创的基于生物标志物的检测可以改变烟雾病(MMD)的管理。本研究旨在通过在大型烟雾病队列中进行全面的蛋白质组学筛选,确定临床相关的脑脊液(CSF)生物标志物。采用液相色谱-串联质谱法分析了104例MMD患者和14例非肿瘤性脑积水患者的脑脊液蛋白谱。对典型通路和差异表达蛋白(DEPs)进行富集分析。蛋白质-蛋白质相互作用网络数据包括所有参与规范通路的蛋白质。潜在标记物通过ELISA验证。加权基因共表达网络分析(WGCNA)揭示了临床因素相关模块。我们鉴定了2463种蛋白质,其中2307种在至少一个样品中被定量。在MMD样本中,共鉴定出321个显著的dep,其中8个蛋白上调,11个蛋白下调。ELISA证实ALB和SLITRK1表达升高。WGCNA揭示了七个与临床因素相关的模块,将术前脑梗死与模块特征基因(ME)红色模块联系起来,将有利的修正Rankin量表评分与MEblack模块联系起来。在meed中,BASP1和LDHA显著上调,而在MEblack中,CD9和EMILIN1上调。我们的研究结果揭示了烟雾病患者脑脊液的蛋白质组学,确定了潜在的新型生物标志物,如SLITRK1和术前脑梗死标志物(BASP1, LDHA)和临床结局标志物(CD9, EMILIN1)。这些标记物有潜力成为烟雾病新的诊断和治疗靶点。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Identification of Biomarkers Related to the Pathogenesis and Prognosis of Pediatric Moyamoya Disease Via Cerebrospinal Fluid Proteomics.

Developing cost-effective, noninvasive biomarker-based tests could transform moyamoya disease (MMD) management. This study aimed to identify clinically relevant cerebrospinal fluid (CSF) biomarkers through comprehensive proteomic screening in a large MMD cohort. CSF protein profiles from 104 MMD patients and 14 non-tumorous hydrocephalus patients were analyzed via liquid chromatography-tandem mass spectrometry. Enrichment analysis was conducted on canonical pathways and differentially expressed proteins (DEPs). The protein-protein interaction network data included all proteins involved in canonical pathways. Potential markers were validated via ELISA. Weighted gene coexpression network analysis (WGCNA) revealed clinical factor-related modules. We identified 2463 proteins, and 2307 were quantified in at least one sample. A total of 321 significant DEPs were identified, with 8 proteins upregulated and 11 proteins downregulated in MMD samples. ELISA confirmed the increased expression of ALB and SLITRK1. WGCNA revealed seven modules correlated with clinical factors, linking preoperative cerebral infarction to the module eigengene (ME) red module and favorable modified Rankin scale scores to the MEblack module. BASP1 and LDHA were significantly upregulated in MEred, whereas CD9 and EMILIN1 were upregulated in MEblack. Our findings shed light on the proteomics of CSF from MMD patients, identifying potential novel biomarkers such as SLITRK1 and markers of preoperative cerebral infarction (BASP1, LDHA) and clinical outcome (CD9, EMILIN1). These markers have potential as new diagnostic and therapeutic targets for MMD.

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来源期刊
Translational Stroke Research
Translational Stroke Research CLINICAL NEUROLOGY-NEUROSCIENCES
CiteScore
13.80
自引率
4.30%
发文量
130
审稿时长
6-12 weeks
期刊介绍: Translational Stroke Research covers basic, translational, and clinical studies. The Journal emphasizes novel approaches to help both to understand clinical phenomenon through basic science tools, and to translate basic science discoveries into the development of new strategies for the prevention, assessment, treatment, and enhancement of central nervous system repair after stroke and other forms of neurotrauma. Translational Stroke Research focuses on translational research and is relevant to both basic scientists and physicians, including but not restricted to neuroscientists, vascular biologists, neurologists, neuroimagers, and neurosurgeons.
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