非绝热动力学中的基准密度泛函近似:视网膜模型中的反式顺式异构化。

IF 5.5 1区 化学 Q2 CHEMISTRY, PHYSICAL
Lea M. Ibele, , , Carlo Adamo, , and , Davide Avagliano*, 
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引用次数: 0

摘要

本文报道了质子化希夫碱3 (PSB3)的顺式光异构化的非绝热动力学密度泛函近似(dfa)的详尽基准,这对时变密度泛函理论(TD-DFT)提出了许多挑战。我们介绍了一种严格的协议,用于非绝热动力学的dfa基准测试,包括初始化、动力学及其评估。将不同的dfa族与高水平参考进行了比较,强调电子种群是评估动力学精度的不合适指标。我们发现几个局部官能团表现出与参考RMS-CASPT2最一致的种群衰减,但严格通过一个由单键扭转主导的失活通道,这在参考文献和文献中是无法获得的。虽然使用100% Hartree-Fock交换的功能产率是唯一正确的异构化行为,但由于沿着错误的扭转坐标预测了人工的局部最小值,时间尺度和量子产率与参考值相差很远。静态能量扫描表明,这个问题可以通过双混合功能来解决,特别是那些平衡非局部交换和关联与距离分离的功能。事实上,他们预测的沿两个扭转坐标的能量分布与RMS-CASPT2参考非常一致。这强调了一旦引入分析梯度,这些dfa将对非绝热动力学领域产生的影响。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Benchmarking Density Functional Approximations in Nonadiabatic Dynamics: Trans–Cis Isomerization in Retinal Model

Benchmarking Density Functional Approximations in Nonadiabatic Dynamics: Trans–Cis Isomerization in Retinal Model

An exhaustive benchmark of density functional approximations (DFAs) for nonadiabatic dynamics is reported on the transcis photoisomerization of the protonated Schiff base 3 (PSB3), which presents numerous challenges for time-dependent density functional theory (TD-DFT). We introduce a rigorous protocol for benchmarking DFAs for nonadiabatic dynamics regarding the initialization, the dynamics, and its evaluation. Different families of DFAs were compared with a high-level reference, highlighting that electronic populations are an unsuitable metric for evaluating the accuracy of dynamics. We found that several local functionals showed the best agreement of the population decay with the reference RMS-CASPT2, but strictly passed through a deactivation channel dominated by a single-bond torsion that is not accessible in the reference and in the literature. While using 100% Hartree–Fock exchange in the functional yields the only correct isomerization behavior, the time scales and quantum yields are far off the reference values, due to an artificial local minimum being predicted along the wrong torsion coordinate. Static energy scans suggest that this issue can be circumvented by double hybrid functionals, in particular those balancing nonlocal exchange and correlation combined with range-separation. Indeed, they predict energy profiles along the two torsion coordinates in close agreement with the RMS-CASPT2 reference. This emphasizes the impact these DFAs will have on the field of nonadiabatic dynamics once analytical gradients are introduced.

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来源期刊
Journal of Chemical Theory and Computation
Journal of Chemical Theory and Computation 化学-物理:原子、分子和化学物理
CiteScore
9.90
自引率
16.40%
发文量
568
审稿时长
1 months
期刊介绍: The Journal of Chemical Theory and Computation invites new and original contributions with the understanding that, if accepted, they will not be published elsewhere. Papers reporting new theories, methodology, and/or important applications in quantum electronic structure, molecular dynamics, and statistical mechanics are appropriate for submission to this Journal. Specific topics include advances in or applications of ab initio quantum mechanics, density functional theory, design and properties of new materials, surface science, Monte Carlo simulations, solvation models, QM/MM calculations, biomolecular structure prediction, and molecular dynamics in the broadest sense including gas-phase dynamics, ab initio dynamics, biomolecular dynamics, and protein folding. The Journal does not consider papers that are straightforward applications of known methods including DFT and molecular dynamics. The Journal favors submissions that include advances in theory or methodology with applications to compelling problems.
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