Qi Liu , Zhenke Zhu , Liang Wei , Wenju Zhang , Shuang Wang , Hongzhao Yuan , Jianping Chen , Tida Ge , Minggang Xu , Yakov Kuzyakov
{"title":"水稻土细菌坏死物分解和启动效应依赖于长期施肥","authors":"Qi Liu , Zhenke Zhu , Liang Wei , Wenju Zhang , Shuang Wang , Hongzhao Yuan , Jianping Chen , Tida Ge , Minggang Xu , Yakov Kuzyakov","doi":"10.1016/j.soilbio.2025.109992","DOIUrl":null,"url":null,"abstract":"<div><div>Long-term fertilization alters nutrient availability and microbial community composition in soil, thereby modulating the decomposition of microbial necromass and its influence on soil organic carbon (SOC) turnover. However, the microbial taxa that drive necromass recycling and how their activity translates into positive or negative priming effects (PEs) on SOC mineralization in rice paddies remain unknown. We combined <sup>13</sup>C isotope probing and high-throughput sequencing to investigate the microbial groups involved in necromass decomposition and their associated PEs on SOC mineralization in paddy soils subjected to 34 years of mineral fertilization or chicken manure application as compared to unfertilized control soil. Following the addition of <sup>13</sup>C-labeled bacterial necromass, 50–60 % of the <sup>13</sup>C was mineralized to CO<sub>2</sub> within 210 days, with fertilized soils releasing 15 % more <sup>13</sup>C–CO<sub>2</sub> compared to unfertilized soils. Microbial uptake of <sup>13</sup>C from necromass occurred sequentially: Gram-positive (Gram<sup>+</sup>) bacteria dominated initial incorporation (within 5 days), followed by uptake by Gram-negative (Gram<sup>−</sup>) bacteria and thereafter by actinomycetes and fungi after 40 days. In unfertilized carbon-limited soils, <em>K</em>-strategist taxa, such as Gram<sup>+</sup> bacteria, <em>Gamma-proteobacteria</em>, <em>Patescibacteria</em>, and <em>Basidiomycota</em>, mined recalcitrant SOC to fulfill their nutrient demands, thus generating a strong positive PE. Conversely, in soils receiving combined mineral and organic inputs, <em>r</em>-strategist taxa, including Gram<sup>−</sup> bacteria, <em>Alpha-proteobacteria</em>, and <em>Ascomycota</em>, preferentially decomposed newly formed microbial necromass rather than SOC, resulting in a negative PE and net SOC accumulation. These findings demonstrate that fertilization-driven shifts in microbial life-history strategies as well as SOC availability govern necromass turnover and its priming consequences, highlighting necromass recycling as a key lever to raise SOC stabilization. Thus, managing fertilizer regimes to favor targeted microbial guilds offers a promising pathway to increase carbon sequestration and sustain soil health in paddy ecosystems.</div></div>","PeriodicalId":21888,"journal":{"name":"Soil Biology & Biochemistry","volume":"211 ","pages":"Article 109992"},"PeriodicalIF":10.3000,"publicationDate":"2025-09-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Bacterial necromass decomposition and priming effects in paddy soils depend on long-term fertilization\",\"authors\":\"Qi Liu , Zhenke Zhu , Liang Wei , Wenju Zhang , Shuang Wang , Hongzhao Yuan , Jianping Chen , Tida Ge , Minggang Xu , Yakov Kuzyakov\",\"doi\":\"10.1016/j.soilbio.2025.109992\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>Long-term fertilization alters nutrient availability and microbial community composition in soil, thereby modulating the decomposition of microbial necromass and its influence on soil organic carbon (SOC) turnover. However, the microbial taxa that drive necromass recycling and how their activity translates into positive or negative priming effects (PEs) on SOC mineralization in rice paddies remain unknown. We combined <sup>13</sup>C isotope probing and high-throughput sequencing to investigate the microbial groups involved in necromass decomposition and their associated PEs on SOC mineralization in paddy soils subjected to 34 years of mineral fertilization or chicken manure application as compared to unfertilized control soil. Following the addition of <sup>13</sup>C-labeled bacterial necromass, 50–60 % of the <sup>13</sup>C was mineralized to CO<sub>2</sub> within 210 days, with fertilized soils releasing 15 % more <sup>13</sup>C–CO<sub>2</sub> compared to unfertilized soils. Microbial uptake of <sup>13</sup>C from necromass occurred sequentially: Gram-positive (Gram<sup>+</sup>) bacteria dominated initial incorporation (within 5 days), followed by uptake by Gram-negative (Gram<sup>−</sup>) bacteria and thereafter by actinomycetes and fungi after 40 days. In unfertilized carbon-limited soils, <em>K</em>-strategist taxa, such as Gram<sup>+</sup> bacteria, <em>Gamma-proteobacteria</em>, <em>Patescibacteria</em>, and <em>Basidiomycota</em>, mined recalcitrant SOC to fulfill their nutrient demands, thus generating a strong positive PE. Conversely, in soils receiving combined mineral and organic inputs, <em>r</em>-strategist taxa, including Gram<sup>−</sup> bacteria, <em>Alpha-proteobacteria</em>, and <em>Ascomycota</em>, preferentially decomposed newly formed microbial necromass rather than SOC, resulting in a negative PE and net SOC accumulation. These findings demonstrate that fertilization-driven shifts in microbial life-history strategies as well as SOC availability govern necromass turnover and its priming consequences, highlighting necromass recycling as a key lever to raise SOC stabilization. Thus, managing fertilizer regimes to favor targeted microbial guilds offers a promising pathway to increase carbon sequestration and sustain soil health in paddy ecosystems.</div></div>\",\"PeriodicalId\":21888,\"journal\":{\"name\":\"Soil Biology & Biochemistry\",\"volume\":\"211 \",\"pages\":\"Article 109992\"},\"PeriodicalIF\":10.3000,\"publicationDate\":\"2025-09-29\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Soil Biology & Biochemistry\",\"FirstCategoryId\":\"97\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S003807172500286X\",\"RegionNum\":1,\"RegionCategory\":\"农林科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"SOIL SCIENCE\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Soil Biology & Biochemistry","FirstCategoryId":"97","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S003807172500286X","RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"SOIL SCIENCE","Score":null,"Total":0}
Bacterial necromass decomposition and priming effects in paddy soils depend on long-term fertilization
Long-term fertilization alters nutrient availability and microbial community composition in soil, thereby modulating the decomposition of microbial necromass and its influence on soil organic carbon (SOC) turnover. However, the microbial taxa that drive necromass recycling and how their activity translates into positive or negative priming effects (PEs) on SOC mineralization in rice paddies remain unknown. We combined 13C isotope probing and high-throughput sequencing to investigate the microbial groups involved in necromass decomposition and their associated PEs on SOC mineralization in paddy soils subjected to 34 years of mineral fertilization or chicken manure application as compared to unfertilized control soil. Following the addition of 13C-labeled bacterial necromass, 50–60 % of the 13C was mineralized to CO2 within 210 days, with fertilized soils releasing 15 % more 13C–CO2 compared to unfertilized soils. Microbial uptake of 13C from necromass occurred sequentially: Gram-positive (Gram+) bacteria dominated initial incorporation (within 5 days), followed by uptake by Gram-negative (Gram−) bacteria and thereafter by actinomycetes and fungi after 40 days. In unfertilized carbon-limited soils, K-strategist taxa, such as Gram+ bacteria, Gamma-proteobacteria, Patescibacteria, and Basidiomycota, mined recalcitrant SOC to fulfill their nutrient demands, thus generating a strong positive PE. Conversely, in soils receiving combined mineral and organic inputs, r-strategist taxa, including Gram− bacteria, Alpha-proteobacteria, and Ascomycota, preferentially decomposed newly formed microbial necromass rather than SOC, resulting in a negative PE and net SOC accumulation. These findings demonstrate that fertilization-driven shifts in microbial life-history strategies as well as SOC availability govern necromass turnover and its priming consequences, highlighting necromass recycling as a key lever to raise SOC stabilization. Thus, managing fertilizer regimes to favor targeted microbial guilds offers a promising pathway to increase carbon sequestration and sustain soil health in paddy ecosystems.
期刊介绍:
Soil Biology & Biochemistry publishes original research articles of international significance focusing on biological processes in soil and their applications to soil and environmental quality. Major topics include the ecology and biochemical processes of soil organisms, their effects on the environment, and interactions with plants. The journal also welcomes state-of-the-art reviews and discussions on contemporary research in soil biology and biochemistry.