通过虚拟筛选和实验验证相结合的方法鉴定潜在SGLT2抑制剂的新小分子。

IF 3.8 2区 化学 Q2 CHEMISTRY, APPLIED
Fei Qin, Huicong Zeng, Li Zhou, Zhenhua Zhou, Yongxin Mao, Youyan Zeng, Rongxiang Guo, Kaixian Chen, Dongyu Zhao, Weiwei Yao, Bin Zhang, Qian Zhou, Bo Li
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引用次数: 0

摘要

钠-葡萄糖共转运蛋白2 (sodium-glucose co-transporter 2, SGLT2)在介导肾滤液内葡萄糖重吸收和调节血糖水平中起着重要作用,是众所周知的糖尿病靶点。许多SGLT2抑制剂(SGLT2i)已被确定为重要的降糖药物,并且高亲和力的新型SGLT2i的研究正在进行中。在本研究中,使用虚拟筛选工作流从化合物库(约16,000种化合物)中筛选101种化合物,该工作流集成了各种对接程序、药效团建模和药物筛选。为了验证虚拟筛选的结果,我们用d-葡萄糖衍生物2-[N-(7-硝基苯-2-氧-1,3-二唑-4-基)氨基]-2-脱氧-d-葡萄糖(2- nbdg)建立了HK-2细胞模型,通过SGLT2测量葡萄糖摄取。选择并购买了12个候选化合物进行后续实验验证。其中,3种非糖苷类化合物对2-NBDG摄取的抑制作用呈剂量依赖性,其对SGLT2的IC50值分别为71.43 μM、72.66 μM和91.44 μM。机制研究表明,在高糖诱导的细胞损伤模型中,这3种化合物均可显著下调SGLT2水平,激活沉默信息调节因子1 (SIRT1)表达。这些发现证实了这些化合物与SGLT2结合的能力,并揭示了它们调节氧化应激和代谢的潜在机制。此外,分子动力学模拟表明,SGLT2与3化合物复合物在100-ns模拟周期内具有较高的结合稳定性。综上所述,我们的研究结果鉴定出3种潜在的SGLT2i,并初步阐明了它们的作用机制,为今后开发新型有效的非糖苷类SGLT2i奠定了基础。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Identification of novel small molecules as potential SGLT2 inhibitors through combined virtual screening and experimental validation.

The sodium-glucose co-transporter 2 (SGLT2) plays an important role in mediating glucose reabsorption within the renal filtrate and regulating blood glucose levels, which makes it a well-known target for diabetes mellitus. A number of SGLT2 inhibitors (SGLT2i) have been established as important antidiabetic drugs, and research on new SGLT2i with high affinity is ongoing. Herein, 101 compounds were screened from a compound library (approximately 16,000 compounds) using a virtual screening workflow that integrated various docking programs, pharmacophore modeling, and druggability filter. To verify the results of virtual screening, we established a HK-2 cell model with d-glucose derivative 2-[N-(7-nitrobenz-2-oxa-1,3-diazol-4-yl) amino]-2-deoxy-d-glucose (2-NBDG) for measuring glucose uptake via SGLT2. 12 candidate compounds were selected and purchased for subsequent experimental validation. Among these, 3 non-glycoside compounds significantly inhibited the 2-NBDG uptake in a dose-dependent manner and their IC50 values for SGLT2 were 71.43 μM, 72.66 μM, and 91.44 μM, respectively. Mechanism studies demonstrated that all 3 compounds significantly downregulated SGLT2 level and activated silent information regulator 1 (SIRT1) expression in high-glucose-induced cell injury models. These findings confirmed the ability of these compounds to bind to SGLT2 and also revealed their potential mechanisms in regulating oxidative stress and metabolism. Furthermore, molecular dynamics simulation indicated the high binding stability of SGLT2 and 3 compounds complexes during a 100-ns simulation period. In conclusion, our results identified 3 potential SGLT2i and preliminarily elucidated their mechanism of action, which lays the foundation for the development of novel and potent non-glycoside SGLT2i in future.

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来源期刊
Molecular Diversity
Molecular Diversity 化学-化学综合
CiteScore
7.30
自引率
7.90%
发文量
219
审稿时长
2.7 months
期刊介绍: Molecular Diversity is a new publication forum for the rapid publication of refereed papers dedicated to describing the development, application and theory of molecular diversity and combinatorial chemistry in basic and applied research and drug discovery. The journal publishes both short and full papers, perspectives, news and reviews dealing with all aspects of the generation of molecular diversity, application of diversity for screening against alternative targets of all types (biological, biophysical, technological), analysis of results obtained and their application in various scientific disciplines/approaches including: combinatorial chemistry and parallel synthesis; small molecule libraries; microwave synthesis; flow synthesis; fluorous synthesis; diversity oriented synthesis (DOS); nanoreactors; click chemistry; multiplex technologies; fragment- and ligand-based design; structure/function/SAR; computational chemistry and molecular design; chemoinformatics; screening techniques and screening interfaces; analytical and purification methods; robotics, automation and miniaturization; targeted libraries; display libraries; peptides and peptoids; proteins; oligonucleotides; carbohydrates; natural diversity; new methods of library formulation and deconvolution; directed evolution, origin of life and recombination; search techniques, landscapes, random chemistry and more;
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