{"title":"从时间分辨x射线散射数据中识别与分子振动相关的振荡信号的综合分析框架","authors":"Jaeseok Kim, Hyunwoo Jeong, Jong Goo Kim","doi":"10.1002/bkcs.70055","DOIUrl":null,"url":null,"abstract":"<p>Understanding the fundamental motions of molecules, particularly vibrational motions, is essential for elucidating chemical reaction mechanisms. Time-resolved X-ray scattering (TRXS) has emerged as a powerful technique for investigating molecular vibrations, as it simultaneously provides both temporal and spatial information on vibrational modes. However, visualizing these vibrations via TRXS remains challenging due to technical limitations in achieving a high signal-to-noise ratio (SNR) and temporal resolution, making it difficult to resolve subtle oscillatory signals arising from molecular vibrations. Here, we present an integrative analysis framework developed to efficiently extract oscillatory signals from TRXS data and verify their association with molecular vibrations. The framework comprises two key steps: the extraction of oscillatory signals using singular spectrum analysis (SSA) and posterior structural analysis to assess the physical relevance of the extracted signals. By applying this scheme to simulated TRXS datasets, we demonstrate that it identifies oscillatory signals embedded in the data more effectively than conventional Fourier transform analysis, even under low SNR conditions. Furthermore, the structural analysis step effectively discriminates physically irrelevant components, such as harmonic and combination frequencies, and high-frequency artifacts from signals corresponding to the fundamental frequencies of molecular vibrations. The proposed data analysis framework is expected to advance studies of molecular vibrations and wavepacket dynamics using TRXS, ultimately providing deeper insights into the ultrafast reaction dynamics.</p>","PeriodicalId":54252,"journal":{"name":"Bulletin of the Korean Chemical Society","volume":"46 9","pages":"887-898"},"PeriodicalIF":2.2000,"publicationDate":"2025-07-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Integrative analysis framework for discerning oscillatory signals associated with molecular vibrations from time-resolved X-ray scattering data\",\"authors\":\"Jaeseok Kim, Hyunwoo Jeong, Jong Goo Kim\",\"doi\":\"10.1002/bkcs.70055\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>Understanding the fundamental motions of molecules, particularly vibrational motions, is essential for elucidating chemical reaction mechanisms. Time-resolved X-ray scattering (TRXS) has emerged as a powerful technique for investigating molecular vibrations, as it simultaneously provides both temporal and spatial information on vibrational modes. However, visualizing these vibrations via TRXS remains challenging due to technical limitations in achieving a high signal-to-noise ratio (SNR) and temporal resolution, making it difficult to resolve subtle oscillatory signals arising from molecular vibrations. Here, we present an integrative analysis framework developed to efficiently extract oscillatory signals from TRXS data and verify their association with molecular vibrations. The framework comprises two key steps: the extraction of oscillatory signals using singular spectrum analysis (SSA) and posterior structural analysis to assess the physical relevance of the extracted signals. By applying this scheme to simulated TRXS datasets, we demonstrate that it identifies oscillatory signals embedded in the data more effectively than conventional Fourier transform analysis, even under low SNR conditions. Furthermore, the structural analysis step effectively discriminates physically irrelevant components, such as harmonic and combination frequencies, and high-frequency artifacts from signals corresponding to the fundamental frequencies of molecular vibrations. The proposed data analysis framework is expected to advance studies of molecular vibrations and wavepacket dynamics using TRXS, ultimately providing deeper insights into the ultrafast reaction dynamics.</p>\",\"PeriodicalId\":54252,\"journal\":{\"name\":\"Bulletin of the Korean Chemical Society\",\"volume\":\"46 9\",\"pages\":\"887-898\"},\"PeriodicalIF\":2.2000,\"publicationDate\":\"2025-07-31\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Bulletin of the Korean Chemical Society\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1002/bkcs.70055\",\"RegionNum\":4,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Bulletin of the Korean Chemical Society","FirstCategoryId":"92","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/bkcs.70055","RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Integrative analysis framework for discerning oscillatory signals associated with molecular vibrations from time-resolved X-ray scattering data
Understanding the fundamental motions of molecules, particularly vibrational motions, is essential for elucidating chemical reaction mechanisms. Time-resolved X-ray scattering (TRXS) has emerged as a powerful technique for investigating molecular vibrations, as it simultaneously provides both temporal and spatial information on vibrational modes. However, visualizing these vibrations via TRXS remains challenging due to technical limitations in achieving a high signal-to-noise ratio (SNR) and temporal resolution, making it difficult to resolve subtle oscillatory signals arising from molecular vibrations. Here, we present an integrative analysis framework developed to efficiently extract oscillatory signals from TRXS data and verify their association with molecular vibrations. The framework comprises two key steps: the extraction of oscillatory signals using singular spectrum analysis (SSA) and posterior structural analysis to assess the physical relevance of the extracted signals. By applying this scheme to simulated TRXS datasets, we demonstrate that it identifies oscillatory signals embedded in the data more effectively than conventional Fourier transform analysis, even under low SNR conditions. Furthermore, the structural analysis step effectively discriminates physically irrelevant components, such as harmonic and combination frequencies, and high-frequency artifacts from signals corresponding to the fundamental frequencies of molecular vibrations. The proposed data analysis framework is expected to advance studies of molecular vibrations and wavepacket dynamics using TRXS, ultimately providing deeper insights into the ultrafast reaction dynamics.
期刊介绍:
The Bulletin of the Korean Chemical Society is an official research journal of the Korean Chemical Society. It was founded in 1980 and reaches out to the chemical community worldwide. It is strictly peer-reviewed and welcomes Accounts, Communications, Articles, and Notes written in English. The scope of the journal covers all major areas of chemistry: analytical chemistry, electrochemistry, industrial chemistry, inorganic chemistry, life-science chemistry, macromolecular chemistry, organic synthesis, non-synthetic organic chemistry, physical chemistry, and materials chemistry.