2016-2017年美国主动监测轮状病毒G8P[8]毒株基因组分析

IF 3.5 3区 医学 Q2 VIROLOGY
Viruses-Basel Pub Date : 2025-09-09 DOI:10.3390/v17091230
Mary C Casey-Moore, Mathew D Esona, Slavica Mijatovic-Rustempasic, Jose Jaimes, Rashi Gautam, Mary E Wikswo, John V Williams, Natasha Halasa, James D Chappell, Daniel C Payne, Mary Allen Staat, Geoffrey A Weinberg, Michael D Bowen
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引用次数: 0

摘要

G8轮状病毒主要与动物有关,很少引起人类感染。人类首次检测到G8毒株发生在1979年左右,自那时以来,它们的存在一直是零星的,特别是在美国。在2016-2017轮状病毒监测季节,新疫苗监测网络(NVSN)在美国的四个地点鉴定了36株G8P[8]轮状病毒株。这项研究展示了这些G8P[8]株的全基因组特征,以及与当前疫苗株Rotarix和RotaTeq的比较序列分析。每个菌株都具有ds -1样主干,一致的基因型群为G8P[8]-I2-R2-C2-M2-A2-N2-T2-E2-H2,与先前在欧洲和亚洲检测到的G8P[8]菌株具有很高的遗传相似性。临床分析显示G8P[8] rva阳性和非G8P[8] rva阳性受试者在住院率、住院时间或严重程度评分方面无显著差异。此外,系统动力学分析确定了这些毒株的进化速率和最近的共同祖先,强调了持续监测轮状病毒基因型以评估这些新出现的G8P[8]毒株传播的重要性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Genomic Analysis of Rotavirus G8P[8] Strains Detected in the United States Through Active Surveillance, 2016-2017.

G8 rotaviruses are primarily associated with animals and infrequently cause infections in humans. The first detection of G8 strains in humans occurred around 1979, and since then, their presence has been sporadic, particularly in the United States (U.S.). During the 2016-2017 rotavirus surveillance season, the New Vaccine Surveillance Network (NVSN) identified 36 G8P[8] rotavirus strains across four sites in the U.S. This study presents the whole-genome characterization of these G8P[8] strains, along with comparative sequence analyses against the current vaccine strains, Rotarix and RotaTeq. Each strain exhibited a DS-1-like backbone with a consensus genotype constellation of G8P[8]-I2-R2-C2-M2-A2-N2-T2-E2-H2 and exhibited high genetic similarities to G8P[8] strains previously detected in Europe and Asia. Clinical analysis revealed no significant differences in hospitalization rates, length of stay, or severity scores between G8P[8] RVA-positive and non-G8P[8] RVA-positive subjects. Additionally, phylodynamic analysis determined the evolutionary rates and the most recent common ancestor for these strains, highlighting the importance of ongoing monitoring of rotavirus genotypes to assess the spread of these emerging G8P[8] strains.

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来源期刊
Viruses-Basel
Viruses-Basel VIROLOGY-
CiteScore
7.30
自引率
12.80%
发文量
2445
审稿时长
1 months
期刊介绍: Viruses (ISSN 1999-4915) is an open access journal which provides an advanced forum for studies of viruses. It publishes reviews, regular research papers, communications, conference reports and short notes. Our aim is to encourage scientists to publish their experimental and theoretical results in as much detail as possible. There is no restriction on the length of the papers. The full experimental details must be provided so that the results can be reproduced. We also encourage the publication of timely reviews and commentaries on topics of interest to the virology community and feature highlights from the virology literature in the ''News and Views'' section. Electronic files or software regarding the full details of the calculation and experimental procedure, if unable to be published in a normal way, can be deposited as supplementary material.
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