植物激素和线虫胁迫下大豆七螺旋跨膜蛋白基因的生物信息学鉴定及表达谱分析。

IF 3.5 3区 生物学 Q1 BIOLOGY
Wenshu Kang, Nawei Qi, Piao Lei
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引用次数: 0

摘要

七螺旋跨膜蛋白(HHPs)最近被认为是真核生物多种生物过程的重要调节因子。本研究从大豆中鉴定出10个GmHHP基因,并对其系统发育关系、顺式调控元件、表达模式和潜在调控网络进行了综合分析。表达谱分析显示,大多数GmHHP基因可被脱落酸(ABA)和茉莉酸甲酯(MeJA)诱导转录,其中GmHHP1和GmHHP7的诱导作用最强。在大豆囊肿线虫(SCN)感染过程中,几个GmHHP基因被下调,表明其可能在植物与线虫相互作用中发挥作用。蛋白相互作用网络分析表明,GmHHPs可以与线粒体丙酮酸载体、碱性植物神经酰胺酶和组蛋白去乙酰化酶相互作用,这可能与aba调控的气孔运动、水分稳态和胁迫适应等生物过程有关。此外,相互作用的miRNA预测表明,包括miR172和miR319在内的保守miRNA可能共同调控GmHHP基因及其相关蛋白伙伴。总的来说,这些发现表明GmHHP基因作为ABA信号和防御反应的膜相关调节因子,特别是在生物胁迫下,如线虫感染。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Bioinformatic Identification and Expression Profiling of Heptahelical Transmembrane Protein Genes in Soybean Under Phytohormone and Nematode Stress.

Heptahelical transmembrane proteins (HHPs) have recently been recognized as crucial regulators of diverse biological processes in eukaryotes. In this study, 10 GmHHP genes were identified in soybean, and a comprehensive analysis was conducted to examine their phylogenetic relationships, cis-regulatory elements, expression patterns, and potential regulatory networks. Expression profiling revealed that most GmHHP genes were transcriptionally induced by abscisic acid (ABA) and methyl jasmonate (MeJA), with GmHHP1 and GmHHP7 exhibiting the strongest induction. During soybean cyst nematode (SCN) infection, several GmHHP genes were down-regulated, suggesting a potential role in plant-nematode interactions. Protein interaction network analysis indicated that GmHHPs could interact with mitochondrial pyruvate carriers, alkaline phytoceramidases, and histone deacetylases, which may link them to ABA-regulated biological processes such as stomatal movement, water homeostasis, and stress adaptation. Furthermore, interacting miRNA prediction demonstrated that conserved miRNAs, including miR172 and miR319, might co-regulate GmHHP genes and their associated protein partners. Collectively, these findings indicate that GmHHP genes function as membrane-associated regulators of ABA signaling and defense responses, particularly under biotic stress, such as nematode infection.

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来源期刊
Biology-Basel
Biology-Basel Biological Science-Biological Science
CiteScore
5.70
自引率
4.80%
发文量
1618
审稿时长
11 weeks
期刊介绍: Biology (ISSN 2079-7737) is an international, peer-reviewed, quick-refereeing open access journal of Biological Science published by MDPI online. It publishes reviews, research papers and communications in all areas of biology and at the interface of related disciplines. Our aim is to encourage scientists to publish their experimental and theoretical results in as much detail as possible. There is no restriction on the length of the papers. The full experimental details must be provided so that the results can be reproduced. Electronic files regarding the full details of the experimental procedure, if unable to be published in a normal way, can be deposited as supplementary material.
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