25种秀丽隐杆线虫疾病模型的高通量行为表型分析,包括患者特异性突变。

IF 4.5 1区 生物学 Q1 BIOLOGY
Thomas J O'Brien, Eneko P Navarro, Consuelo Barroso, Lara Menzies, Enrique Martinez-Perez, David Carling, André E X Brown
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引用次数: 0

摘要

背景:基因诊断是快速和廉价的,挑战了我们评估新的致病变异的功能影响或确定潜在治疗方法的能力。包括秀丽隐杆线虫在内的模式生物提供了系统地模拟遗传疾病的可能性,但缺乏可靠的高通量方法。结果:在这里,我们展示了自动化多维行为跟踪可以检测25种新的秀丽隐杆线虫疾病模型的表型,这些模型跨越纯合的功能丧失等位基因和患者特异性的单氨基酸替换。我们发现,与野生型动物相比,跨多种遗传途径(包括BORC、FLCN和FNIP-2)的纯合子功能丧失(LoF)突变体在姿势、运动和刺激反应方面表现出强烈的、易于检测的异常。smc-3突变株通过引入患者识别的错义变化建模,即使完全丢失smc-3是致命的,也表现出发育异常和独特的行为特征。相比之下,另一个重要基因tnpo-2的患者源性错义突变最初并没有表现出强烈的表型,但它可能被化学“致敏”(例如,与涕灭威一起),可能有助于未来的药物筛选。结论:我们的研究结果表明,可扩展的行为表型可以捕获广泛的突变效应-从强到弱-在患者化身的蠕虫系中。我们预计,随着新的疾病变异的发现,这种标准化的方法将使罕见遗传疾病的系统药物再利用成为可能。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
High-throughput behavioural phenotyping of 25 C. elegans disease models including patient-specific mutations.

Background: Genetic diagnosis is fast and cheap, challenging our capacity to evaluate the functional impact of novel disease-causing variants or identify potential therapeutics. Model organisms including C. elegans present the possibility of systematically modelling genetic diseases, yet robust, high-throughput methods have been lacking.

Results: Here we show that automated multi-dimensional behaviour tracking can detect phenotypes in 25 new C. elegans disease models spanning homozygous loss-of-function alleles and patient-specific single-amino-acid substitutions. We find that homozygous loss-of-function (LoF) mutants across diverse genetic pathways (including BORC, FLCN, and FNIP-2) exhibit strong, readily detectable abnormalities in posture, locomotion, and stimulus responses compared to wild-type animals. An smc-3 mutant strain-modelled by introducing a patient-identified missense change-exhibited developmental anomalies and distinct behavioural profiles even though complete loss of SMC-3 is lethal. In contrast, patient-derived missense mutations in another essential gene, tnpo-2, did not show a strong phenotype initially but it could be "sensitized" chemically (e.g., with aldicarb), potentially facilitating future drug screens.

Conclusions: Our findings show that scalable behavioural phenotyping can capture a wide range of mutant effects-from strong to subtle-in patient-avatar worm lines. We anticipate that this standardized approach will enable systematic drug repurposing for rare genetic disorders as new disease variants are discovered.

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来源期刊
BMC Biology
BMC Biology 生物-生物学
CiteScore
7.80
自引率
1.90%
发文量
260
审稿时长
3 months
期刊介绍: BMC Biology is a broad scope journal covering all areas of biology. Our content includes research articles, new methods and tools. BMC Biology also publishes reviews, Q&A, and commentaries.
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