突尼斯牛结核病的现场评估:基于人工智能方法的IDR、PCRMpb70和血清学测试预测

IF 4.2 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Said Jaajaa, Wafa Bouglita, Oussema Khamessi, Ghada Mahjoub, Sana Dhaouadi, Ahmed Rjeb, Kais Ghedira, Hanen Smadhi, Ramzi Boubaker Elandoulsi
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引用次数: 0

摘要

牛结核(bTB)由牛分枝杆菌(牛分枝杆菌)引起,仍然是世界范围内主要的人畜共患疾病和经济负担。在突尼斯,结核已存在多年,但由于诊断工具有限和缺乏资源,消灭该疾病的努力放慢了速度。结核菌素皮内反应试验(IDR),也称为结核菌素皮肤试验(TST),仍然是监测的主要工具,但其低灵敏度和特异性表明需要更好的诊断方法。本研究评估了IDR、PCRMpb70和三种血清学快速检测的诊断性能:Quickvet Ab®(Ac1,检测重组牛分枝杆菌抗原的抗体)、Vetdiagnostix Ab®(Ac2,检测重组MPB70/MPB83融合蛋白的抗体)和Vetdiagnostix Ag®(检测天然牛分枝杆菌抗原复合物的牛IFN-γ单克隆抗体)。基于人工智能、贝叶斯潜类模型(BLCM)分析,PCRMpb70因其高灵敏度(Se)和完美特异性(Sp)与其他测试一起评估,被确定为最可靠的参考标准。使用PCRMpb70作为代理金标准,通过随机森林算法使用监督机器学习来评估单个和组合诊断测试的预测性能。主要结果是,在试验动物中确认了高bTB患病率(46.37%),尽管患病率估计值因所使用的诊断测试而有很大差异(平均±9.76)。IDR2/Ac2、IDR2/Ag和IDR2/Ac2/Ag的组合——第二次皮内试验(IDR2)与Ac2、Ag或两者的抗体试验配对,被证明是最翔实的和互补的PCR替代方法。这些方法为分子检测有限或无法获得的现场环境提供了实用和有效的诊断选择。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Field-oriented assessment of bovine tuberculosis in Tunisian cattle: IDR, PCRMpb70 and serological test prediction based on AI approaches.

Bovine tuberculosis (bTB), caused by Mycobacterium bovis (M. bovis), remains a major zoonotic and economically burdensome disease worldwide. In Tunisia, where bTB has remained present for many years, Efforts to eliminate the disease have been slowed down by limited diagnostic tools and a lack of resources. The tuberculin Intra Dermal Reaction test (IDR), also known as Tuberculin Skin Test (TST), is still the main tool for surveillance, but its low sensitivity and specificity show the need for better diagnostic methods. This study evaluated the diagnostic performance of IDR, PCRMpb70 and three serological rapid tests: Quickvet Ab® (Ac1, detecting antibodies against a recombinant M.bovis antigen), Vetdiagnostix Ab® (Ac2, detecting antibodies against a recombinant MPB70/MPB83 fusion protein), and Vetdiagnostix Ag® (Monoclonal antibodies against Bovine IFN-γ detecting a native M. bovis antigen complex) in Tunisian cattle (n = 32). Based on AI, Bayesian Latent Class Model (BLCM) analysis, PCRMpb70 was identified as the most reliable reference standard due to its high sensitivity (Se) and perfect specificity (Sp) when assessed alongside other tests. Using PCRMpb70 as a proxy gold standard, supervised machine learning via the Random Forest algorithm was employed to assess the predictive performance of the individual and combined diagnostic tests. As a main result, a high bTB prevalence (46.37%) was confirmed in the tested animals, although prevalence estimates varied considerably depending on the diagnostic test used (average ± 9.76). The combinations IDR2/Ac2, IDR2/Ag, and IDR2/Ac2/Ag pair a second IntraDermal test (IDR2) with antibody tests for Ac2, Ag, or both, proved to be the most informative and complementary alternatives to PCR. These approaches provide practical and effective diagnostic options for field settings where access to molecular testing is limited or unavailable.

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来源期刊
World journal of microbiology & biotechnology
World journal of microbiology & biotechnology 工程技术-生物工程与应用微生物
CiteScore
6.30
自引率
2.40%
发文量
257
审稿时长
2.5 months
期刊介绍: World Journal of Microbiology and Biotechnology publishes research papers and review articles on all aspects of Microbiology and Microbial Biotechnology. Since its foundation, the Journal has provided a forum for research work directed toward finding microbiological and biotechnological solutions to global problems. As many of these problems, including crop productivity, public health and waste management, have major impacts in the developing world, the Journal especially reports on advances for and from developing regions. Some topics are not within the scope of the Journal. Please do not submit your manuscript if it falls into one of the following categories: · Virology · Simple isolation of microbes from local sources · Simple descriptions of an environment or reports on a procedure · Veterinary, agricultural and clinical topics in which the main focus is not on a microorganism · Data reporting on host response to microbes · Optimization of a procedure · Description of the biological effects of not fully identified compounds or undefined extracts of natural origin · Data on not fully purified enzymes or procedures in which they are applied All articles published in the Journal are independently refereed.
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