{"title":"一种新型海洋拟杆菌门海藻酸盐利用策略的表征:来自Roseihalotalea indica的见解。","authors":"Zheng Fu, Shunqin You, Defang Wu, Runying Zeng, Kai Tang, Zhuhua Chan","doi":"10.3390/md23090334","DOIUrl":null,"url":null,"abstract":"<p><p>Alginate, a major polysaccharide in brown algae, is vital for the carbon cycling of the ocean ecosystem and holds promise for biotechnological applications. Marine <i>Bacteroidetes</i>, known for the ability to degrade complex polysaccharides, play an important role in the ocean carbon cycle; however, the detailed alginate degradation pattern remains to be further explored. In this study, an alginate utilization locus was identified in the genome of a new marine <i>Bacteroidetes</i>, <i>Roseihalotalea indica</i> gen. nov. sp. nov. TK19036<sup>T</sup>, and encodes two new alginate lyases, RiAlyPL6 and RiAlyPL17, which play potential roles in the degradation and utilization of alginate. RiAlyPL6 and RiAlyPL17 have distinct degradation products and substrate preferences, revealing the adaptation of the strain to utilize alginate with different M/G ratios. Based on the results in this paper, we have proposed a model for the degradation and utilization mechanism of alginate in <i>Roseihalotalea indica</i> gen. nov. sp. nov. TK19036<sup>T</sup>. All in all, our research provides a new insight into the alginate mechanisms within marine <i>Roseihalotalea</i>, and the two novel alginate lyases are excellent candidates for preparation and application.</p>","PeriodicalId":18222,"journal":{"name":"Marine Drugs","volume":"23 9","pages":""},"PeriodicalIF":5.4000,"publicationDate":"2025-08-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12472053/pdf/","citationCount":"0","resultStr":"{\"title\":\"Characterization of Alginate Utilization Strategy in a Novel Marine <i>Bacteroidetes</i>: Insights from <i>Roseihalotalea indica</i> gen. nov. sp. nov. TK19036<sup>T</sup>.\",\"authors\":\"Zheng Fu, Shunqin You, Defang Wu, Runying Zeng, Kai Tang, Zhuhua Chan\",\"doi\":\"10.3390/md23090334\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Alginate, a major polysaccharide in brown algae, is vital for the carbon cycling of the ocean ecosystem and holds promise for biotechnological applications. Marine <i>Bacteroidetes</i>, known for the ability to degrade complex polysaccharides, play an important role in the ocean carbon cycle; however, the detailed alginate degradation pattern remains to be further explored. In this study, an alginate utilization locus was identified in the genome of a new marine <i>Bacteroidetes</i>, <i>Roseihalotalea indica</i> gen. nov. sp. nov. TK19036<sup>T</sup>, and encodes two new alginate lyases, RiAlyPL6 and RiAlyPL17, which play potential roles in the degradation and utilization of alginate. RiAlyPL6 and RiAlyPL17 have distinct degradation products and substrate preferences, revealing the adaptation of the strain to utilize alginate with different M/G ratios. Based on the results in this paper, we have proposed a model for the degradation and utilization mechanism of alginate in <i>Roseihalotalea indica</i> gen. nov. sp. nov. TK19036<sup>T</sup>. All in all, our research provides a new insight into the alginate mechanisms within marine <i>Roseihalotalea</i>, and the two novel alginate lyases are excellent candidates for preparation and application.</p>\",\"PeriodicalId\":18222,\"journal\":{\"name\":\"Marine Drugs\",\"volume\":\"23 9\",\"pages\":\"\"},\"PeriodicalIF\":5.4000,\"publicationDate\":\"2025-08-24\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12472053/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Marine Drugs\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.3390/md23090334\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"CHEMISTRY, MEDICINAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Marine Drugs","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.3390/md23090334","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"CHEMISTRY, MEDICINAL","Score":null,"Total":0}
引用次数: 0
摘要
褐藻酸盐是褐藻中的一种主要多糖,对海洋生态系统的碳循环至关重要,并有望在生物技术上得到应用。海洋拟杆菌门,以其降解复杂多糖的能力而闻名,在海洋碳循环中发挥重要作用;然而,详细的海藻酸盐降解模式仍有待进一步探索。本研究在新的海洋拟杆菌门Roseihalotalea indica gen. nov. sp. nov. TK19036T基因组中发现了一个海藻酸盐利用位点,并编码了两个新的海藻酸盐裂解酶RiAlyPL6和RiAlyPL17,这两个酶在海藻酸盐的降解和利用中发挥了潜在的作用。RiAlyPL6和RiAlyPL17具有不同的降解产物和底物偏好,揭示了菌株对不同M/G比海藻酸盐的适应性。在此基础上,建立了褐藻酸盐在Roseihalotalea indica gen. nov. sp. nov. TK19036T中降解利用机理的模型。总而言之,我们的研究为海洋蔷薇藻酸盐的机制提供了新的视角,这两种新的海藻酸盐裂解酶是制备和应用的优秀候选人。
Characterization of Alginate Utilization Strategy in a Novel Marine Bacteroidetes: Insights from Roseihalotalea indica gen. nov. sp. nov. TK19036T.
Alginate, a major polysaccharide in brown algae, is vital for the carbon cycling of the ocean ecosystem and holds promise for biotechnological applications. Marine Bacteroidetes, known for the ability to degrade complex polysaccharides, play an important role in the ocean carbon cycle; however, the detailed alginate degradation pattern remains to be further explored. In this study, an alginate utilization locus was identified in the genome of a new marine Bacteroidetes, Roseihalotalea indica gen. nov. sp. nov. TK19036T, and encodes two new alginate lyases, RiAlyPL6 and RiAlyPL17, which play potential roles in the degradation and utilization of alginate. RiAlyPL6 and RiAlyPL17 have distinct degradation products and substrate preferences, revealing the adaptation of the strain to utilize alginate with different M/G ratios. Based on the results in this paper, we have proposed a model for the degradation and utilization mechanism of alginate in Roseihalotalea indica gen. nov. sp. nov. TK19036T. All in all, our research provides a new insight into the alginate mechanisms within marine Roseihalotalea, and the two novel alginate lyases are excellent candidates for preparation and application.
期刊介绍:
Marine Drugs (ISSN 1660-3397) publishes reviews, regular research papers and short notes on the research, development and production of drugs from the sea. Our aim is to encourage scientists to publish their experimental and theoretical research in as much detail as possible, particularly synthetic procedures and characterization information for bioactive compounds. There is no restriction on the length of the experimental section.