Qiqi Wang, Mengyi Zhao, Anqing Liu, Yuwei Zhao, Zhenxin Fan, Yang Huang, Zhan Gao, Miao He
{"title":"利用长期培养组学和宏基因组学研究血小板中共存细菌。","authors":"Qiqi Wang, Mengyi Zhao, Anqing Liu, Yuwei Zhao, Zhenxin Fan, Yang Huang, Zhan Gao, Miao He","doi":"10.3389/fcimb.2025.1607554","DOIUrl":null,"url":null,"abstract":"<p><strong>Introduction: </strong>Bacterial contamination of platelets presents a substantial risk in transfusion medicine. Conventional detection approaches have limitations in sensitivity and bacterial coverage. In this study we employed culturomics and metagenomics to investigate co-existent bacteria in platelets, aiming to enhance transfusion safety and explore healthy bacteremia.</p><p><strong>Methods: </strong>Platelet from 6 healthy donors underwent a 30-days extensive cultivation and isolation procedure using in-house culturomics.</p><p><strong>Results: </strong>16S rRNA sequencing identified 90 bacterial strains across 3 phyla, 5 classes, 5orders, 7 families, 9 genera, and 23 species. Metagenomics sequencing revealed greater microbial diversity, detecting an average of 3018 microbial species per sample. The bacteria concurrently detected by both culturomics and metagenomics included species from Firmicutes, Actinobacteria, and Proteobacteria.</p><p><strong>Discussion: </strong>This combined approach validates the presence of bacteria in platelets, likely originating from the skin, gut, oral cavity, environment, or bloodstream, providing a comprehensive strategy for bacterial identification in transfusion products.</p>","PeriodicalId":12458,"journal":{"name":"Frontiers in Cellular and Infection Microbiology","volume":"15 ","pages":"1607554"},"PeriodicalIF":4.8000,"publicationDate":"2025-09-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12457405/pdf/","citationCount":"0","resultStr":"{\"title\":\"Investigation of co-existing bacteria in platelets by employing long-term culturomics and metagenomics.\",\"authors\":\"Qiqi Wang, Mengyi Zhao, Anqing Liu, Yuwei Zhao, Zhenxin Fan, Yang Huang, Zhan Gao, Miao He\",\"doi\":\"10.3389/fcimb.2025.1607554\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Introduction: </strong>Bacterial contamination of platelets presents a substantial risk in transfusion medicine. Conventional detection approaches have limitations in sensitivity and bacterial coverage. In this study we employed culturomics and metagenomics to investigate co-existent bacteria in platelets, aiming to enhance transfusion safety and explore healthy bacteremia.</p><p><strong>Methods: </strong>Platelet from 6 healthy donors underwent a 30-days extensive cultivation and isolation procedure using in-house culturomics.</p><p><strong>Results: </strong>16S rRNA sequencing identified 90 bacterial strains across 3 phyla, 5 classes, 5orders, 7 families, 9 genera, and 23 species. Metagenomics sequencing revealed greater microbial diversity, detecting an average of 3018 microbial species per sample. The bacteria concurrently detected by both culturomics and metagenomics included species from Firmicutes, Actinobacteria, and Proteobacteria.</p><p><strong>Discussion: </strong>This combined approach validates the presence of bacteria in platelets, likely originating from the skin, gut, oral cavity, environment, or bloodstream, providing a comprehensive strategy for bacterial identification in transfusion products.</p>\",\"PeriodicalId\":12458,\"journal\":{\"name\":\"Frontiers in Cellular and Infection Microbiology\",\"volume\":\"15 \",\"pages\":\"1607554\"},\"PeriodicalIF\":4.8000,\"publicationDate\":\"2025-09-10\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12457405/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Frontiers in Cellular and Infection Microbiology\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.3389/fcimb.2025.1607554\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2025/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"Q2\",\"JCRName\":\"IMMUNOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Frontiers in Cellular and Infection Microbiology","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.3389/fcimb.2025.1607554","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/1/1 0:00:00","PubModel":"eCollection","JCR":"Q2","JCRName":"IMMUNOLOGY","Score":null,"Total":0}
Investigation of co-existing bacteria in platelets by employing long-term culturomics and metagenomics.
Introduction: Bacterial contamination of platelets presents a substantial risk in transfusion medicine. Conventional detection approaches have limitations in sensitivity and bacterial coverage. In this study we employed culturomics and metagenomics to investigate co-existent bacteria in platelets, aiming to enhance transfusion safety and explore healthy bacteremia.
Methods: Platelet from 6 healthy donors underwent a 30-days extensive cultivation and isolation procedure using in-house culturomics.
Results: 16S rRNA sequencing identified 90 bacterial strains across 3 phyla, 5 classes, 5orders, 7 families, 9 genera, and 23 species. Metagenomics sequencing revealed greater microbial diversity, detecting an average of 3018 microbial species per sample. The bacteria concurrently detected by both culturomics and metagenomics included species from Firmicutes, Actinobacteria, and Proteobacteria.
Discussion: This combined approach validates the presence of bacteria in platelets, likely originating from the skin, gut, oral cavity, environment, or bloodstream, providing a comprehensive strategy for bacterial identification in transfusion products.
期刊介绍:
Frontiers in Cellular and Infection Microbiology is a leading specialty journal, publishing rigorously peer-reviewed research across all pathogenic microorganisms and their interaction with their hosts. Chief Editor Yousef Abu Kwaik, University of Louisville is supported by an outstanding Editorial Board of international experts. This multidisciplinary open-access journal is at the forefront of disseminating and communicating scientific knowledge and impactful discoveries to researchers, academics, clinicians and the public worldwide.
Frontiers in Cellular and Infection Microbiology includes research on bacteria, fungi, parasites, viruses, endosymbionts, prions and all microbial pathogens as well as the microbiota and its effect on health and disease in various hosts. The research approaches include molecular microbiology, cellular microbiology, gene regulation, proteomics, signal transduction, pathogenic evolution, genomics, structural biology, and virulence factors as well as model hosts. Areas of research to counteract infectious agents by the host include the host innate and adaptive immune responses as well as metabolic restrictions to various pathogenic microorganisms, vaccine design and development against various pathogenic microorganisms, and the mechanisms of antibiotic resistance and its countermeasures.