{"title":"泰国西部主要疟疾病媒微小按蚊自然种群中与寻找宿主行为相关的嗅觉途径的遗传变异","authors":"Kanchon Pusawang, Daibin Zhong, Patchara Sriwichai, Yudthana Samung, Atiporn Saeung, Kittipat Aupalee, Pradya Somboon, Anuluck Junkum, Somsakul Pop Wongpalee, Jassada Saingamsook, Jetsumon Sattabongkot, Liwang Cui, Guiyun Yan","doi":"10.1186/s13071-025-07029-x","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>Malaria transmission hinges on infected Anopheles mosquitoes biting humans, with carbon dioxide (CO<sub>2</sub>), host odor, and body heat acting as key attractants. Along the Thai-Myanmar border, Anopheles minimus (the Funestus Group), a primary malaria vector, exhibits a stronger preference for human hosts than species of the Maculatus Group. Elucidating the genetic basis of this feeding behavior is essential for improving malaria control strategies.</p><p><strong>Methods: </strong>Wild Anopheles mosquitoes were collected in Tha Song Yang district, Tak province, Thailand, from July 2019 to November 2020, using cow-baited traps, human landing catches, and Center for Disease Control (CDC) light traps. Specimens were identified morphologically and confirmed by Sanger sequencing of the cytochrome c oxidase subunit 1 (cox1) gene. We then performed whole-genome sequencing on An. minimus females categorized by host-seeking behavior: cow-baited collection (COW), human landing indoor (HLI), and human landing outdoor (HLO) to investigate the genetic determinants of host preference.</p><p><strong>Results: </strong>Anopheles minimus females accounted for 25% of total samples (504/1,997). Cox1 sequencing revealed 143 unique haplotypes among 287 specimens, forming two major phylogenetic lineages, A (181 sequences) and B (106 sequences), suggestive of potential cryptic diversity. Whole-genome sequencing of An. minimus Lineage A from COW, HLI, and HLO groups yielded 12,659,785 variants. After filtering, 68,975 non-synonymous single-nucleotide polymorphisms (nsSNPs) remained. Comparing allele frequencies across the three pooled groups (FDR-adjusted p-value < 0.001) yielded 2,629, 2,948, and 4,369 significant nsSNPs, respectively. Gene Ontology (GO) analysis of genes harboring these nsSNPs showed strong enrichment for olfaction-related terms. The top six nsSNPs with olfactory annotations from each group comparison were selected for validation; Sanger sequencing confirmed their association with host-seeking preference. The VectorBase gene IDs for these candidate nsSNPs are AMIN001807, AMIN001339, AMIN003886, AMIN000912, AMIN003926, AMIN011060, AMIN002342, and AMIN015480.</p><p><strong>Conclusions: </strong>The observed significant genomic variance in field-collected An. minimus females, categorized by collection methods (reflecting host-seeking behavior), proposes a genetic underpinning for these behavioral variations. Differential nsSNPs within olfactory pathway genes might be functionally linked to host-seeking in this important malaria vector.</p>","PeriodicalId":19793,"journal":{"name":"Parasites & Vectors","volume":"18 1","pages":"385"},"PeriodicalIF":3.5000,"publicationDate":"2025-09-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12462203/pdf/","citationCount":"0","resultStr":"{\"title\":\"Genetic variation in olfactory pathways associated with host-seeking behavior in natural populations of Anopheles minimus, a primary malaria vector in western Thailand.\",\"authors\":\"Kanchon Pusawang, Daibin Zhong, Patchara Sriwichai, Yudthana Samung, Atiporn Saeung, Kittipat Aupalee, Pradya Somboon, Anuluck Junkum, Somsakul Pop Wongpalee, Jassada Saingamsook, Jetsumon Sattabongkot, Liwang Cui, Guiyun Yan\",\"doi\":\"10.1186/s13071-025-07029-x\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Background: </strong>Malaria transmission hinges on infected Anopheles mosquitoes biting humans, with carbon dioxide (CO<sub>2</sub>), host odor, and body heat acting as key attractants. Along the Thai-Myanmar border, Anopheles minimus (the Funestus Group), a primary malaria vector, exhibits a stronger preference for human hosts than species of the Maculatus Group. Elucidating the genetic basis of this feeding behavior is essential for improving malaria control strategies.</p><p><strong>Methods: </strong>Wild Anopheles mosquitoes were collected in Tha Song Yang district, Tak province, Thailand, from July 2019 to November 2020, using cow-baited traps, human landing catches, and Center for Disease Control (CDC) light traps. Specimens were identified morphologically and confirmed by Sanger sequencing of the cytochrome c oxidase subunit 1 (cox1) gene. We then performed whole-genome sequencing on An. minimus females categorized by host-seeking behavior: cow-baited collection (COW), human landing indoor (HLI), and human landing outdoor (HLO) to investigate the genetic determinants of host preference.</p><p><strong>Results: </strong>Anopheles minimus females accounted for 25% of total samples (504/1,997). Cox1 sequencing revealed 143 unique haplotypes among 287 specimens, forming two major phylogenetic lineages, A (181 sequences) and B (106 sequences), suggestive of potential cryptic diversity. Whole-genome sequencing of An. minimus Lineage A from COW, HLI, and HLO groups yielded 12,659,785 variants. After filtering, 68,975 non-synonymous single-nucleotide polymorphisms (nsSNPs) remained. Comparing allele frequencies across the three pooled groups (FDR-adjusted p-value < 0.001) yielded 2,629, 2,948, and 4,369 significant nsSNPs, respectively. Gene Ontology (GO) analysis of genes harboring these nsSNPs showed strong enrichment for olfaction-related terms. The top six nsSNPs with olfactory annotations from each group comparison were selected for validation; Sanger sequencing confirmed their association with host-seeking preference. The VectorBase gene IDs for these candidate nsSNPs are AMIN001807, AMIN001339, AMIN003886, AMIN000912, AMIN003926, AMIN011060, AMIN002342, and AMIN015480.</p><p><strong>Conclusions: </strong>The observed significant genomic variance in field-collected An. minimus females, categorized by collection methods (reflecting host-seeking behavior), proposes a genetic underpinning for these behavioral variations. Differential nsSNPs within olfactory pathway genes might be functionally linked to host-seeking in this important malaria vector.</p>\",\"PeriodicalId\":19793,\"journal\":{\"name\":\"Parasites & Vectors\",\"volume\":\"18 1\",\"pages\":\"385\"},\"PeriodicalIF\":3.5000,\"publicationDate\":\"2025-09-24\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12462203/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Parasites & Vectors\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.1186/s13071-025-07029-x\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"PARASITOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Parasites & Vectors","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1186/s13071-025-07029-x","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"PARASITOLOGY","Score":null,"Total":0}
Genetic variation in olfactory pathways associated with host-seeking behavior in natural populations of Anopheles minimus, a primary malaria vector in western Thailand.
Background: Malaria transmission hinges on infected Anopheles mosquitoes biting humans, with carbon dioxide (CO2), host odor, and body heat acting as key attractants. Along the Thai-Myanmar border, Anopheles minimus (the Funestus Group), a primary malaria vector, exhibits a stronger preference for human hosts than species of the Maculatus Group. Elucidating the genetic basis of this feeding behavior is essential for improving malaria control strategies.
Methods: Wild Anopheles mosquitoes were collected in Tha Song Yang district, Tak province, Thailand, from July 2019 to November 2020, using cow-baited traps, human landing catches, and Center for Disease Control (CDC) light traps. Specimens were identified morphologically and confirmed by Sanger sequencing of the cytochrome c oxidase subunit 1 (cox1) gene. We then performed whole-genome sequencing on An. minimus females categorized by host-seeking behavior: cow-baited collection (COW), human landing indoor (HLI), and human landing outdoor (HLO) to investigate the genetic determinants of host preference.
Results: Anopheles minimus females accounted for 25% of total samples (504/1,997). Cox1 sequencing revealed 143 unique haplotypes among 287 specimens, forming two major phylogenetic lineages, A (181 sequences) and B (106 sequences), suggestive of potential cryptic diversity. Whole-genome sequencing of An. minimus Lineage A from COW, HLI, and HLO groups yielded 12,659,785 variants. After filtering, 68,975 non-synonymous single-nucleotide polymorphisms (nsSNPs) remained. Comparing allele frequencies across the three pooled groups (FDR-adjusted p-value < 0.001) yielded 2,629, 2,948, and 4,369 significant nsSNPs, respectively. Gene Ontology (GO) analysis of genes harboring these nsSNPs showed strong enrichment for olfaction-related terms. The top six nsSNPs with olfactory annotations from each group comparison were selected for validation; Sanger sequencing confirmed their association with host-seeking preference. The VectorBase gene IDs for these candidate nsSNPs are AMIN001807, AMIN001339, AMIN003886, AMIN000912, AMIN003926, AMIN011060, AMIN002342, and AMIN015480.
Conclusions: The observed significant genomic variance in field-collected An. minimus females, categorized by collection methods (reflecting host-seeking behavior), proposes a genetic underpinning for these behavioral variations. Differential nsSNPs within olfactory pathway genes might be functionally linked to host-seeking in this important malaria vector.
期刊介绍：
Parasites & Vectors is an open access, peer-reviewed online journal dealing with the biology of parasites, parasitic diseases, intermediate hosts, vectors and vector-borne pathogens. Manuscripts published in this journal will be available to all worldwide, with no barriers to access, immediately following acceptance. However, authors retain the copyright of their material and may use it, or distribute it, as they wish.
Manuscripts on all aspects of the basic and applied biology of parasites, intermediate hosts, vectors and vector-borne pathogens will be considered. In addition to the traditional and well-established areas of science in these fields, we also aim to provide a vehicle for publication of the rapidly developing resources and technology in parasite, intermediate host and vector genomics and their impacts on biological research. We are able to publish large datasets and extensive results, frequently associated with genomic and post-genomic technologies, which are not readily accommodated in traditional journals. Manuscripts addressing broader issues, for example economics, social sciences and global climate change in relation to parasites, vectors and disease control, are also welcomed.
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