分叉真菌甲虫Bolitotherus cornutus的染色体水平基因组组装,这是研究野生社会进化的模式系统。

IF 2.5 2区 生物学 Q2 EVOLUTIONARY BIOLOGY
Kyle M Benowitz, Zachery M Esterline, Allina A Win, Vincent A Formica, Edmund D Brodie
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引用次数: 0

摘要

分叉真菌甲虫(Bolitotherus cornutus)长期以来一直是野生真菌甲虫种群生态学、行为生态学、化学生态学和自然选择研究的模式生物。今天,它已成为理解社会进化和群体选择的最佳模型系统之一。为了理解群体选择的机制驱动及其最终的进化结果,开始在分子水平上研究这些特征是至关重要的。在这里,我们通过为这个物种生产染色体水平的基因组组装,向这些目标迈出了必要的第一步。使用PacBio HiFi和Hi-C测序技术的组合,我们生产了一个196 Mb的基因组组装,包括10个主要的染色体支架以及组装的线粒体基因组。我们还提供了12459个蛋白质编码基因的精心整理的注释。这些资源的质量和完整性为今后牛角菇的遗传和基因组研究提供了必要的工具。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A chromosome-level genome assembly of the forked fungus beetle Bolitotherus cornutus, a model system for studying social evolution in the wild.

The forked fungus beetle Bolitotherus cornutus has long served as a model organism for the study of population ecology, behavior, chemical ecology, and natural selection in the wild. Today, it has become one of the best model systems for the understanding of social evolution and group selection. To understand the mechanistic drivers of group selection and its ultimate evolutionary consequences, it is crucial to begin studying these traits at the molecular level. Here, we take the first necessary step towards these goals by producing a chromosome-level genome assembly for this species. Using a combination of PacBio HiFi and Hi-C sequencing technologies, we produce a 196 Mb genome assembly with ten major chromosomal scaffolds as well as an assembled mitochondrial genome. We also provide a carefully curated annotation of 12,459 protein-coding genes. The quality and completeness of these resources present essential tools for future genetic and genomic studies of B. cornutus.

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来源期刊
Journal of Heredity
Journal of Heredity 生物-遗传学
CiteScore
5.20
自引率
6.50%
发文量
63
审稿时长
6-12 weeks
期刊介绍: Over the last 100 years, the Journal of Heredity has established and maintained a tradition of scholarly excellence in the publication of genetics research. Virtually every major figure in the field has contributed to the journal. Established in 1903, Journal of Heredity covers organismal genetics across a wide range of disciplines and taxa. Articles include such rapidly advancing fields as conservation genetics of endangered species, population structure and phylogeography, molecular evolution and speciation, molecular genetics of disease resistance in plants and animals, genetic biodiversity and relevant computer programs.
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