Pisit Charoenwongwatthana, Halah Ahmed, Alex Charlton, Mark D Gidley, Vsevolod Telezhkin, Jamie Coulter, Chien-Yi Chang
{"title":"口腔细菌中犬尿酸酶的鉴定及功能验证。","authors":"Pisit Charoenwongwatthana, Halah Ahmed, Alex Charlton, Mark D Gidley, Vsevolod Telezhkin, Jamie Coulter, Chien-Yi Chang","doi":"10.1080/20002297.2025.2561213","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>The kynurenine (KYN) pathway produces key metabolites for immunoregulation and neuromodulation in humans, but its presence and activity in the oral microbiome are unclear. This study investigates the functionality of the key kynureninase (KynU), which catalyses kynurenine to anthranilic acid (AA), in oral bacteria.</p><p><strong>Methods: </strong>Bioinformatic analysis identified putative <i>kynU</i> genes in oral bacterial genomes, and structural similarity of the predicted proteins was evaluated using Template Modeling (TM)-score and Root Mean Square Deviation (RMSD) analyses. Selected <i>kynU</i> sequences were cloned into the pBAD-His A expression vector. Enzymatic activity was accessed by quantifying AA concentrations using liquid chromatography-mass spectrometry (LC-MS).</p><p><strong>Results: </strong>Among 71 species, seven oral bacteria were identified to possess the <i>kynU</i>. Structural analyses indicated KynU from four species may fold into functional enzymes. Three recombinant KynU from <i>Burkholderia</i> <i>cepacia</i>, <i>Ralstonia</i> <i>pickettii</i>, and <i>Stenotrophomonas</i> <i>maltophilia</i> produced detectable levels of AA (21.27 ± 12.0 µM, 19.59 ± 8.6 µM, and 46.43 ± 36.8 µM, respectively), confirming functional KYN-to-AA conversion.</p><p><strong>Conclusions: </strong>This study demonstrates KynU activity in oral bacteria, revealing an unrecognised aspect of microbial metabolism with potential implications for host-microbe interactions. Further investigation is required to elucidate the biological significance of bacterial KYN metabolites and their role in oral diseases.</p>","PeriodicalId":16598,"journal":{"name":"Journal of Oral Microbiology","volume":"17 1","pages":"2561213"},"PeriodicalIF":5.5000,"publicationDate":"2025-09-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12451956/pdf/","citationCount":"0","resultStr":"{\"title\":\"Identification and functional validation of kynureninases from oral bacteria.\",\"authors\":\"Pisit Charoenwongwatthana, Halah Ahmed, Alex Charlton, Mark D Gidley, Vsevolod Telezhkin, Jamie Coulter, Chien-Yi Chang\",\"doi\":\"10.1080/20002297.2025.2561213\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Background: </strong>The kynurenine (KYN) pathway produces key metabolites for immunoregulation and neuromodulation in humans, but its presence and activity in the oral microbiome are unclear. This study investigates the functionality of the key kynureninase (KynU), which catalyses kynurenine to anthranilic acid (AA), in oral bacteria.</p><p><strong>Methods: </strong>Bioinformatic analysis identified putative <i>kynU</i> genes in oral bacterial genomes, and structural similarity of the predicted proteins was evaluated using Template Modeling (TM)-score and Root Mean Square Deviation (RMSD) analyses. Selected <i>kynU</i> sequences were cloned into the pBAD-His A expression vector. Enzymatic activity was accessed by quantifying AA concentrations using liquid chromatography-mass spectrometry (LC-MS).</p><p><strong>Results: </strong>Among 71 species, seven oral bacteria were identified to possess the <i>kynU</i>. Structural analyses indicated KynU from four species may fold into functional enzymes. Three recombinant KynU from <i>Burkholderia</i> <i>cepacia</i>, <i>Ralstonia</i> <i>pickettii</i>, and <i>Stenotrophomonas</i> <i>maltophilia</i> produced detectable levels of AA (21.27 ± 12.0 µM, 19.59 ± 8.6 µM, and 46.43 ± 36.8 µM, respectively), confirming functional KYN-to-AA conversion.</p><p><strong>Conclusions: </strong>This study demonstrates KynU activity in oral bacteria, revealing an unrecognised aspect of microbial metabolism with potential implications for host-microbe interactions. Further investigation is required to elucidate the biological significance of bacterial KYN metabolites and their role in oral diseases.</p>\",\"PeriodicalId\":16598,\"journal\":{\"name\":\"Journal of Oral Microbiology\",\"volume\":\"17 1\",\"pages\":\"2561213\"},\"PeriodicalIF\":5.5000,\"publicationDate\":\"2025-09-21\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12451956/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Oral Microbiology\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.1080/20002297.2025.2561213\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2025/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"Q2\",\"JCRName\":\"MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Oral Microbiology","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1080/20002297.2025.2561213","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/1/1 0:00:00","PubModel":"eCollection","JCR":"Q2","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
Identification and functional validation of kynureninases from oral bacteria.
Background: The kynurenine (KYN) pathway produces key metabolites for immunoregulation and neuromodulation in humans, but its presence and activity in the oral microbiome are unclear. This study investigates the functionality of the key kynureninase (KynU), which catalyses kynurenine to anthranilic acid (AA), in oral bacteria.
Methods: Bioinformatic analysis identified putative kynU genes in oral bacterial genomes, and structural similarity of the predicted proteins was evaluated using Template Modeling (TM)-score and Root Mean Square Deviation (RMSD) analyses. Selected kynU sequences were cloned into the pBAD-His A expression vector. Enzymatic activity was accessed by quantifying AA concentrations using liquid chromatography-mass spectrometry (LC-MS).
Results: Among 71 species, seven oral bacteria were identified to possess the kynU. Structural analyses indicated KynU from four species may fold into functional enzymes. Three recombinant KynU from Burkholderiacepacia, Ralstoniapickettii, and Stenotrophomonasmaltophilia produced detectable levels of AA (21.27 ± 12.0 µM, 19.59 ± 8.6 µM, and 46.43 ± 36.8 µM, respectively), confirming functional KYN-to-AA conversion.
Conclusions: This study demonstrates KynU activity in oral bacteria, revealing an unrecognised aspect of microbial metabolism with potential implications for host-microbe interactions. Further investigation is required to elucidate the biological significance of bacterial KYN metabolites and their role in oral diseases.
期刊介绍:
As the first Open Access journal in its field, the Journal of Oral Microbiology aims to be an influential source of knowledge on the aetiological agents behind oral infectious diseases. The journal is an international forum for original research on all aspects of ''oral health''. Articles which seek to understand ''oral health'' through exploration of the pathogenesis, virulence, host-parasite interactions, and immunology of oral infections are of particular interest. However, the journal also welcomes work that addresses the global agenda of oral infectious diseases and articles that present new strategies for treatment and prevention or improvements to existing strategies.
Topics: ''oral health'', microbiome, genomics, host-pathogen interactions, oral infections, aetiologic agents, pathogenesis, molecular microbiology systemic diseases, ecology/environmental microbiology, treatment, diagnostics, epidemiology, basic oral microbiology, and taxonomy/systematics.
Article types: original articles, notes, review articles, mini-reviews and commentaries