将光谱与机器学习和深度学习相结合,用于监测绿色植物对二氧化硅纳米颗粒的反应

IF 4.6 2区 化学 Q1 SPECTROSCOPY
Aishwary Awasthi , Aradhana Tripathi , Chhavi Baran , K.N. Uttam
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引用次数: 0

摘要

本研究探讨了将共聚焦微拉曼光谱和紫外可见光谱与机器学习和深度学习算法相结合的潜力,以评估暴露于不同浓度二氧化硅纳米颗粒(SiO2 NPs)的绿豆植物的生化反应。对获得的拉曼光谱数据的分析揭示了一种浓度依赖模式,低浓度(0.2-0.6 mM)会降低关键生物分子的强度,如类胡萝卜素、木质素、果胶、蛋白质、碳水化合物和纤维素,而高浓度(1.2-1.4 mM)会增强强度。利用UV-Vis光谱对光合色素的估算与拉曼光谱结果相辅相成,叶绿素和类胡萝卜素水平在较低浓度下先下降,然后显著增加。在计算方法中,LDA-等降维技术的应用显著提高了AGNES (RI = 1.00)、DBSCAN (RI = 0.99)、k-means (RI = 1.00)等聚类算法学习和深度学习模型的性能,实现了较高的分类精度。像随机森林和支持向量机这样的监督算法在没有降维的情况下表现最佳,准确率分别为78%和79%。这种集成的光谱计算方法为监测植物与纳米材料的相互作用提供了一种非侵入性、无标签和强大的框架。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Integrating spectroscopy with machine learning and deep learning for monitoring mung plant responses to silicon dioxide nanoparticles

Integrating spectroscopy with machine learning and deep learning for monitoring mung plant responses to silicon dioxide nanoparticles
This study investigates the potential of integration of confocal micro-Raman and UV–Vis spectroscopy with machine learning and deep learning algorithms to assess biochemical responses of mung bean plants exposed to silicon dioxide nanoparticles (SiO2 NPs) at varying concentrations. The analysis of acquired Raman spectral data reveals a concentration dependent pattern where low concentrations (0.2–0.6 mM) reduce the intensities of key biomolecules such as carotenoids, lignin, pectin, protein, carbohydrate, and cellulose, while higher concentrations (1.2–1.4 mM) trigger enhancement in intensities. The estimation of photosynthetic pigments using UV–Vis spectroscopy complements the Raman spectroscopy results, with chlorophyll and carotenoid levels decreasing at lower concentrations before significantly increasing. Among computational approaches, the application of dimensionality reduction techniques such as LDA- significantly improve the performance of clustering algorithms learnings like AGNES (RI = 1.00), DBSCAN (RI = 0.99), and k-means (RI = 1.00) and deep learning models, achieving high classification accuracy. Supervised algorithms like random forest and support vector machine perform optimally without dimensionality reduction, showing accuracies of 78 % and 79 % respectively. This integrated spectroscopy-computational approach offers a non-invasive, label-free, and robust framework for monitoring plant-nanomaterial interactions.
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来源期刊
CiteScore
8.40
自引率
11.40%
发文量
1364
审稿时长
40 days
期刊介绍: Spectrochimica Acta, Part A: Molecular and Biomolecular Spectroscopy (SAA) is an interdisciplinary journal which spans from basic to applied aspects of optical spectroscopy in chemistry, medicine, biology, and materials science. The journal publishes original scientific papers that feature high-quality spectroscopic data and analysis. From the broad range of optical spectroscopies, the emphasis is on electronic, vibrational or rotational spectra of molecules, rather than on spectroscopy based on magnetic moments. Criteria for publication in SAA are novelty, uniqueness, and outstanding quality. Routine applications of spectroscopic techniques and computational methods are not appropriate. Topics of particular interest of Spectrochimica Acta Part A include, but are not limited to: Spectroscopy and dynamics of bioanalytical, biomedical, environmental, and atmospheric sciences, Novel experimental techniques or instrumentation for molecular spectroscopy, Novel theoretical and computational methods, Novel applications in photochemistry and photobiology, Novel interpretational approaches as well as advances in data analysis based on electronic or vibrational spectroscopy.
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