迁徙人群肠道菌群特征及个体追踪的初步研究

IF 2.5 3区 医学 Q1 MEDICINE, LEGAL
Chudong Wang , Feifei Zheng , Xiaoyi Fu, Qiheng Xie, Lagabaiyila Zha, Jifeng Cai, Jie Yan, Jienan Li
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引用次数: 0

摘要

DNA分析在法医个体鉴定中有着广泛的应用。然而,传统的法医方法无法确定流动人口的短期或长期居住,这给追踪这些人口带来了挑战。肠道微生物可以区分不同地理位置的人。然而,对迁徙群体的微生物变化和结构组成缺乏详细的探索。为了描述移民路线并通过微生物组成确定移民群体,我们对50名中国移民和131名非洲移民的肠道微生物进行了16S rRNA测序。结果显示,与来源地和目的地人群相比,迁徙人群的肠道微生物组更接近目的地人群(p <; 0.01)。然而,Ruminococcus f_Luminocccae和其他7种微生物的丰度与非洲人群相似。此外,迁徙人群具有独特的Gemmiger和Catenibacteria微生物群落。进一步的研究表明,影响人群微生物组成的环境因素包括在中国度过的时间、咖啡摄入量和睡眠节奏。最后,构建三个种群间微生物差异的随机森林模型,种群推断准确率达到81.9 %。本研究可以识别移民群体,确认个人的居住地和族裔,为法医个人追踪提供帮助。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Preliminary study on characterization of gut microbiota and individual tracing in migratory populations
DNA profiling is widely used in forensic individual identification. Yet, traditional forensic methods fail to determine the short - or long - term residence of migrant populations, imposing challenges in tracking these populations. Intestinal microorganisms can differentiate people across various geographical locations. Nevertheless, there's a lack of detailed exploration regarding the microbial changes and structural composition of migratory groups. To characterize migration routes and identify migratory groups via microbial composition, we conducted 16S rRNA sequencing on intestinal microorganisms from 50 Chinese and 131 Africans who migrated to China. Results showed that, compared to source and destination populations, the gut microbiome of the migrating population was closer to the destination population (p < 0.01). However, the abundance of Ruminococcus f_Luminocccae and seven other microorganisms remained similar to the African population. Also, the migrating population had unique Gemmiger and Catenibacteria microbial communities. Further research indicated that environmental factors affecting population microbial composition included time spent in China, coffee intake, and sleep rhythm. Finally, constructing a random forest model for microbial differences among the three populations achieved 81.9 % accuracy in population inference. This study can identify migratory groups and confirm individuals' place of residence and ethnic origin, offering assistance for forensic individual tracing.
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来源期刊
Forensic science international
Forensic science international 医学-医学:法
CiteScore
5.00
自引率
9.10%
发文量
285
审稿时长
49 days
期刊介绍: Forensic Science International is the flagship journal in the prestigious Forensic Science International family, publishing the most innovative, cutting-edge, and influential contributions across the forensic sciences. Fields include: forensic pathology and histochemistry, chemistry, biochemistry and toxicology, biology, serology, odontology, psychiatry, anthropology, digital forensics, the physical sciences, firearms, and document examination, as well as investigations of value to public health in its broadest sense, and the important marginal area where science and medicine interact with the law. The journal publishes: Case Reports Commentaries Letters to the Editor Original Research Papers (Regular Papers) Rapid Communications Review Articles Technical Notes.
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