一种快速无纯化LAMP法检测大口黑鲈病毒的微创样品

IF 3.9 1区 农林科学 Q1 FISHERIES
Chaoguang Wei , Chenwei Yu , Jinjie Zu , Xinyang Li , Yilan Bao , Feibiao Pang , Zhichao Wu , Dan Xu , Jinzhao Song , Peng Hu
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引用次数: 0

摘要

大口黑鲈拉纳病毒(LMBV)导致大口黑鲈(Micropterus salmoides)严重死亡,严重威胁水产养殖的可持续性。传统的基于pcr的LMBV检测方法是资源密集型的,需要专门的设备、熟练的人员和纯化的DNA样本,从而限制了它们的实际应用。在这里,我们建立了一种简化的、无纯化的环介导等温扩增(LAMP)方法,该方法与便携式荧光检测装置(wd -1)相结合,用于快速、灵敏地检测LMBV。通过体外感染模型,我们证明了微创样品的粗裂解物,特别是腹膜液,可以直接用于LAMP检测,而无需核酸纯化。整个检测工作流程(从样品采集到结果解释)在40分钟内完成。该方法为LMBV的早期检测提供了一种灵敏、快速、经济的诊断方法,并有可能推广到其他水生病原体的快速检测。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A rapid purification-free LAMP assay for detection of largemouth Bass Ranavirus using minimally invasive samples
Largemouth Bass Ranavirus (LMBV) causes severe mortality in largemouth bass (Micropterus salmoides), significantly threatening aquaculture sustainability. Conventional PCR-based methods for LMBV detection are resource-intensive, requiring specialized equipment, skilled personnel, and purified DNA samples, thus limiting their practical applications. Here, we established a simplified, purification-free loop-mediated isothermal amplification (LAMP) assay integrated with a portable fluorescence detection device (WeD-1) for rapid and sensitive detection of LMBV. Using an in vitro infection model, we demonstrated that crude lysates from minimally invasive samples, particularly peritoneal fluid, could be directly used in LAMP assays without nucleic acid purification. The entire detection workflow—from sample collection to result interpretation—was completed within 40  minutes (min). This approach provides a sensitive, rapid, and cost-effective diagnostic method for early detection of LMBV and can potentially be extended for rapid detection of other aquatic pathogens.
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来源期刊
Aquaculture
Aquaculture 农林科学-海洋与淡水生物学
CiteScore
8.60
自引率
17.80%
发文量
1246
审稿时长
56 days
期刊介绍: Aquaculture is an international journal for the exploration, improvement and management of all freshwater and marine food resources. It publishes novel and innovative research of world-wide interest on farming of aquatic organisms, which includes finfish, mollusks, crustaceans and aquatic plants for human consumption. Research on ornamentals is not a focus of the Journal. Aquaculture only publishes papers with a clear relevance to improving aquaculture practices or a potential application.
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