Dongyao Wang , Ying Zhang , Yao Yang , Yuxiao Tang , Yan Liu , Hui Shen , Xinhao Li , Lianghua Wang , Feng Lu
{"title":"环境生物毒素冈田酸的网络毒理学分析与深度学习预测","authors":"Dongyao Wang , Ying Zhang , Yao Yang , Yuxiao Tang , Yan Liu , Hui Shen , Xinhao Li , Lianghua Wang , Feng Lu","doi":"10.1016/j.aquatox.2025.107578","DOIUrl":null,"url":null,"abstract":"<div><div>The study aims to promote a network toxicology and deep learning strategy to efficiently investigate the underlying neurotoxicity molecular mechanisms of okadaic acid (OA) , which is a typical representative of diarrhetic shellfish poisoning in bio-environmental or food chain system. 95 hub targets associated with OA-related diarrhea, and neurotoxicity were identified using K means algorithm of network toxicology strategy at the macro level. More specifically, the key target AKT1 was identified using DeepPurpose algorithm of deep learning strategy at the micro level. The synergistic integration of network toxicology and deep learning approaches enables multidimensional complementarity across systems biology and molecular interaction levels; the former constructs global toxicity networks, while the latter elucidates key target mechanisms. This multi-scale approach enhances study efficiency and mechanistic precision. Further on, molecular docking and bio-layer interferometry were conducted to confirm the binding between AKT1 and OA (INTERACTION_ENERGY =56.99 kcal/mol, K<sub>D</sub>=6.61E-11 M). This research provides a theoretical and correlational basis of OA-induced diarrhea-related brain injury, as well as establishing a decision-making for the treatment of bio-environmental or foodborne OA exposure.</div></div>","PeriodicalId":248,"journal":{"name":"Aquatic Toxicology","volume":"289 ","pages":"Article 107578"},"PeriodicalIF":4.3000,"publicationDate":"2025-09-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Toxic effects of environmental biotoxin okadaic acid by network toxicology analysis and deep learning prediction\",\"authors\":\"Dongyao Wang , Ying Zhang , Yao Yang , Yuxiao Tang , Yan Liu , Hui Shen , Xinhao Li , Lianghua Wang , Feng Lu\",\"doi\":\"10.1016/j.aquatox.2025.107578\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>The study aims to promote a network toxicology and deep learning strategy to efficiently investigate the underlying neurotoxicity molecular mechanisms of okadaic acid (OA) , which is a typical representative of diarrhetic shellfish poisoning in bio-environmental or food chain system. 95 hub targets associated with OA-related diarrhea, and neurotoxicity were identified using K means algorithm of network toxicology strategy at the macro level. More specifically, the key target AKT1 was identified using DeepPurpose algorithm of deep learning strategy at the micro level. The synergistic integration of network toxicology and deep learning approaches enables multidimensional complementarity across systems biology and molecular interaction levels; the former constructs global toxicity networks, while the latter elucidates key target mechanisms. This multi-scale approach enhances study efficiency and mechanistic precision. Further on, molecular docking and bio-layer interferometry were conducted to confirm the binding between AKT1 and OA (INTERACTION_ENERGY =56.99 kcal/mol, K<sub>D</sub>=6.61E-11 M). This research provides a theoretical and correlational basis of OA-induced diarrhea-related brain injury, as well as establishing a decision-making for the treatment of bio-environmental or foodborne OA exposure.</div></div>\",\"PeriodicalId\":248,\"journal\":{\"name\":\"Aquatic Toxicology\",\"volume\":\"289 \",\"pages\":\"Article 107578\"},\"PeriodicalIF\":4.3000,\"publicationDate\":\"2025-09-16\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Aquatic Toxicology\",\"FirstCategoryId\":\"93\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0166445X2500342X\",\"RegionNum\":2,\"RegionCategory\":\"环境科学与生态学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"MARINE & FRESHWATER BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Aquatic Toxicology","FirstCategoryId":"93","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0166445X2500342X","RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"MARINE & FRESHWATER BIOLOGY","Score":null,"Total":0}
Toxic effects of environmental biotoxin okadaic acid by network toxicology analysis and deep learning prediction
The study aims to promote a network toxicology and deep learning strategy to efficiently investigate the underlying neurotoxicity molecular mechanisms of okadaic acid (OA) , which is a typical representative of diarrhetic shellfish poisoning in bio-environmental or food chain system. 95 hub targets associated with OA-related diarrhea, and neurotoxicity were identified using K means algorithm of network toxicology strategy at the macro level. More specifically, the key target AKT1 was identified using DeepPurpose algorithm of deep learning strategy at the micro level. The synergistic integration of network toxicology and deep learning approaches enables multidimensional complementarity across systems biology and molecular interaction levels; the former constructs global toxicity networks, while the latter elucidates key target mechanisms. This multi-scale approach enhances study efficiency and mechanistic precision. Further on, molecular docking and bio-layer interferometry were conducted to confirm the binding between AKT1 and OA (INTERACTION_ENERGY =56.99 kcal/mol, KD=6.61E-11 M). This research provides a theoretical and correlational basis of OA-induced diarrhea-related brain injury, as well as establishing a decision-making for the treatment of bio-environmental or foodborne OA exposure.
期刊介绍:
Aquatic Toxicology publishes significant contributions that increase the understanding of the impact of harmful substances (including natural and synthetic chemicals) on aquatic organisms and ecosystems.
Aquatic Toxicology considers both laboratory and field studies with a focus on marine/ freshwater environments. We strive to attract high quality original scientific papers, critical reviews and expert opinion papers in the following areas: Effects of harmful substances on molecular, cellular, sub-organismal, organismal, population, community, and ecosystem level; Toxic Mechanisms; Genetic disturbances, transgenerational effects, behavioral and adaptive responses; Impacts of harmful substances on structure, function of and services provided by aquatic ecosystems; Mixture toxicity assessment; Statistical approaches to predict exposure to and hazards of contaminants
The journal also considers manuscripts in other areas, such as the development of innovative concepts, approaches, and methodologies, which promote the wider application of toxicological datasets to the protection of aquatic environments and inform ecological risk assessments and decision making by relevant authorities.