{"title":"人工智能与基因组编辑的融合:植物分子育种的新时代","authors":"Himanshu Saini , Vishal Johar , Radhajogita Mondal , Shalu Vyas , Vinita Bisht","doi":"10.1016/j.pmpp.2025.102952","DOIUrl":null,"url":null,"abstract":"<div><div>The convergence of artificial intelligence (AI) and genome editing technologies marks a transformative frontier in molecular plant breeding. AI, with its capacity for data integration, pattern recognition, and predictive analytics, significantly enhances the precision and efficiency of genome editing tools like CRISPR-Cas systems. By harnessing AI algorithms, researchers can identify key genetic targets, optimize guide RNA design, and predict off-target effects, thereby accelerating trait improvement and crop development. This synergy enables the rapid development of climate-resilient, high-yield, and disease-resistant plant varieties. Moreover, AI-driven models facilitate the analysis of vast genomic, phenotypic, and environmental datasets, offering insights into complex gene-trait-environment interactions. The integration of AI with genome editing not only streamlines molecular breeding pipelines but also opens new avenues for sustainable agriculture and food security. This review explores recent advances, challenges, and future prospects at the intersection of AI and genome editing, highlighting its transformative potential in the next generation of plant breeding.</div></div>","PeriodicalId":20046,"journal":{"name":"Physiological and Molecular Plant Pathology","volume":"140 ","pages":"Article 102952"},"PeriodicalIF":3.3000,"publicationDate":"2025-09-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Integration of artificial intelligence with genome editing: A new era for molecular plant breeding\",\"authors\":\"Himanshu Saini , Vishal Johar , Radhajogita Mondal , Shalu Vyas , Vinita Bisht\",\"doi\":\"10.1016/j.pmpp.2025.102952\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>The convergence of artificial intelligence (AI) and genome editing technologies marks a transformative frontier in molecular plant breeding. AI, with its capacity for data integration, pattern recognition, and predictive analytics, significantly enhances the precision and efficiency of genome editing tools like CRISPR-Cas systems. By harnessing AI algorithms, researchers can identify key genetic targets, optimize guide RNA design, and predict off-target effects, thereby accelerating trait improvement and crop development. This synergy enables the rapid development of climate-resilient, high-yield, and disease-resistant plant varieties. Moreover, AI-driven models facilitate the analysis of vast genomic, phenotypic, and environmental datasets, offering insights into complex gene-trait-environment interactions. The integration of AI with genome editing not only streamlines molecular breeding pipelines but also opens new avenues for sustainable agriculture and food security. This review explores recent advances, challenges, and future prospects at the intersection of AI and genome editing, highlighting its transformative potential in the next generation of plant breeding.</div></div>\",\"PeriodicalId\":20046,\"journal\":{\"name\":\"Physiological and Molecular Plant Pathology\",\"volume\":\"140 \",\"pages\":\"Article 102952\"},\"PeriodicalIF\":3.3000,\"publicationDate\":\"2025-09-13\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Physiological and Molecular Plant Pathology\",\"FirstCategoryId\":\"97\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0885576525003911\",\"RegionNum\":3,\"RegionCategory\":\"农林科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"PLANT SCIENCES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Physiological and Molecular Plant Pathology","FirstCategoryId":"97","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0885576525003911","RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"PLANT SCIENCES","Score":null,"Total":0}
Integration of artificial intelligence with genome editing: A new era for molecular plant breeding
The convergence of artificial intelligence (AI) and genome editing technologies marks a transformative frontier in molecular plant breeding. AI, with its capacity for data integration, pattern recognition, and predictive analytics, significantly enhances the precision and efficiency of genome editing tools like CRISPR-Cas systems. By harnessing AI algorithms, researchers can identify key genetic targets, optimize guide RNA design, and predict off-target effects, thereby accelerating trait improvement and crop development. This synergy enables the rapid development of climate-resilient, high-yield, and disease-resistant plant varieties. Moreover, AI-driven models facilitate the analysis of vast genomic, phenotypic, and environmental datasets, offering insights into complex gene-trait-environment interactions. The integration of AI with genome editing not only streamlines molecular breeding pipelines but also opens new avenues for sustainable agriculture and food security. This review explores recent advances, challenges, and future prospects at the intersection of AI and genome editing, highlighting its transformative potential in the next generation of plant breeding.
期刊介绍:
Physiological and Molecular Plant Pathology provides an International forum for original research papers, reviews, and commentaries on all aspects of the molecular biology, biochemistry, physiology, histology and cytology, genetics and evolution of plant-microbe interactions.
Papers on all kinds of infective pathogen, including viruses, prokaryotes, fungi, and nematodes, as well as mutualistic organisms such as Rhizobium and mycorrhyzal fungi, are acceptable as long as they have a bearing on the interaction between pathogen and plant.