东北菱形龟种群遗传变异的水平和分配。

IF 2.5 2区 生物学 Q2 EVOLUTIONARY BIOLOGY
Amanda L Lyons, Rebecca Y Kartzinel, Bianca R P Brown, Scott W Buchanan, Lisa M Ferguson, Brian A Williamson, Tyler R Kartzinel
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引用次数: 0

摘要

菱形龟(Malaclemys terrapin)是一种中等大小的龟,是北美东部盐沼生态系统中的主要掠食者。由于栖息地丧失和过度捕捞,水龟在历史上一直面临着数量下降的问题,这导致它在其活动范围的北部被列入多个司法管辖区。为了描述东北地区龟鳖遗传变异的水平和划分,我们使用了限制性内切位点相关DNA测序(RADseq)。我们分析了来自18个地点的116个个体的遗传变异。居群内遗传多样性相对较低(He = 0.080 ~ 0.122),与纬度呈显著负相关。此外,遗传分化水平中等(两两FST = 0.00-0.19),各群体的两两平均FST与纬度呈正相关。总之,这些结果与大西洋中部更新世避难所的连续殖民模型一致。空间遗传变异最好用景观模型来解释,该模型认为迁移仅限于沿海生境,在沿海生境中,北部范围边缘种群保持相对较低的遗传多样性,并且比南部种群具有更大的遗传差异,这与它们更大的地理隔离性相一致。混合分析显示遗传聚类较弱,遗传聚类的分布反映了距离隔离和人类介导易位的综合历史效应。恢复水龟栖息地或重新引入圈养个体的区域努力应考虑历史基因流动模式,认识到东北地区边缘相对独特和孤立的种群。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Levels and partitioning of genetic variation of northeastern populations of diamondback terrapin (Malaclemys terrapin).

The diamondback terrapin (Malaclemys terrapin) is a mid-sized turtle that serves as a keystone predator in salt marsh ecosystems of eastern North America. The terrapin has historically faced population declines due to habitat loss and overharvesting, which has resulted in its listing under multiple jurisdictions across the northern part of its range. To characterize levels and partitioning of terrapin genetic variation throughout the northeast region, we used restriction site-associated DNA sequencing (RADseq). We analyzed genetic variation among 116 individuals sampled across 18 sites. Within-population genetic diversity was relatively low (He = 0.080-0.122), and we observed a strong negative correlation between diversity and latitude. Furthermore, levels of genetic differentiation were moderate (pairwise FST = 0.00-0.19), with the mean pairwise FST of each population exhibiting a strong positive correlation with latitude. Together, these results are consistent with a model of serial colonization from a Pleistocene refugium in the mid-Atlantic. Spatial genetic variation was best explained by a landscape model that considered migration to be limited to coastal habitats, where northern range-edge populations maintained comparatively low genetic diversity and were more genetically distinct than populations to the south-consistent with their greater geographic isolation. Admixture analyses revealed weak genetic clustering, with the distribution of genetic clusters reflecting the combined historical effects of isolation-by-distance and human-mediated translocations. Regional efforts to restore terrapin habitat or reintroduce captive individuals should consider patterns of historic gene flow, cognizant of the relatively distinct and isolated populations at the northeastern range edge.

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来源期刊
Journal of Heredity
Journal of Heredity 生物-遗传学
CiteScore
5.20
自引率
6.50%
发文量
63
审稿时长
6-12 weeks
期刊介绍: Over the last 100 years, the Journal of Heredity has established and maintained a tradition of scholarly excellence in the publication of genetics research. Virtually every major figure in the field has contributed to the journal. Established in 1903, Journal of Heredity covers organismal genetics across a wide range of disciplines and taxa. Articles include such rapidly advancing fields as conservation genetics of endangered species, population structure and phylogeography, molecular evolution and speciation, molecular genetics of disease resistance in plants and animals, genetic biodiversity and relevant computer programs.
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