Efraín Magaña, Simone Pezzuto, Francisco Sahli Costabal
{"title":"基于物理信息的神经网络的心房纤维定向集成学习。","authors":"Efraín Magaña, Simone Pezzuto, Francisco Sahli Costabal","doi":"10.1113/JP288001","DOIUrl":null,"url":null,"abstract":"<p><p>The anisotropic structure of the myocardium is a key determinant of the cardiac function. To date there is no imaging modality to assess in vivo the cardiac fibre structure. We recently proposed Fibernet, a method for the automatic identification of the anisotropic conduction - and thus fibres - in the atria from local electrical recordings. Fibernet uses cardiac activation as recorded during electroanatomical mappings to infer local conduction properties using physics-informed neural networks. In this work we extend Fibernet to cope with the uncertainty in the estimated fibre field. Specifically we use an ensemble of neural networks to produce multiple samples, all fitting the observed data, and compute posterior statistics. We also introduce a methodology to select the best fibre orientation members and define the input of the neural networks directly on the atrial surface. With these improvements we outperform the previous methodology in terms of fibre orientation error in eight different atrial anatomies. Currently our approach can estimate the fibre orientation and conduction velocities in under 7 min with quantified uncertainty, which opens the door to its application in clinical practice. We hope the proposed methodology will enable further personalisation of cardiac digital twins for precision medicine. KEY POINTS: The direction of heart muscle fibres strongly affects how electrical signals travel, but current imaging methods cannot measure these fibres inside the living atria. We improved our previous method (Fibernet) by introducing <math><semantics><mi>Δ</mi> <annotation>$\\Delta$</annotation></semantics> </math> -Fibernet, which is more accurate and can estimate uncertainty in the results. <math><semantics><mi>Δ</mi> <annotation>$\\Delta$</annotation></semantics> </math> -Fibernet works directly on the surface of the heart and includes a new approach to select the most reliable fibre direction. The method produces results in under 7 min and could support personalised treatment planning for heart rhythm disorders.</p>","PeriodicalId":50088,"journal":{"name":"Journal of Physiology-London","volume":" ","pages":""},"PeriodicalIF":4.4000,"publicationDate":"2025-09-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Ensemble learning of the atrial fibre orientation with physics-informed neural networks.\",\"authors\":\"Efraín Magaña, Simone Pezzuto, Francisco Sahli Costabal\",\"doi\":\"10.1113/JP288001\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>The anisotropic structure of the myocardium is a key determinant of the cardiac function. To date there is no imaging modality to assess in vivo the cardiac fibre structure. We recently proposed Fibernet, a method for the automatic identification of the anisotropic conduction - and thus fibres - in the atria from local electrical recordings. Fibernet uses cardiac activation as recorded during electroanatomical mappings to infer local conduction properties using physics-informed neural networks. In this work we extend Fibernet to cope with the uncertainty in the estimated fibre field. Specifically we use an ensemble of neural networks to produce multiple samples, all fitting the observed data, and compute posterior statistics. We also introduce a methodology to select the best fibre orientation members and define the input of the neural networks directly on the atrial surface. With these improvements we outperform the previous methodology in terms of fibre orientation error in eight different atrial anatomies. Currently our approach can estimate the fibre orientation and conduction velocities in under 7 min with quantified uncertainty, which opens the door to its application in clinical practice. We hope the proposed methodology will enable further personalisation of cardiac digital twins for precision medicine. KEY POINTS: The direction of heart muscle fibres strongly affects how electrical signals travel, but current imaging methods cannot measure these fibres inside the living atria. We improved our previous method (Fibernet) by introducing <math><semantics><mi>Δ</mi> <annotation>$\\\\Delta$</annotation></semantics> </math> -Fibernet, which is more accurate and can estimate uncertainty in the results. <math><semantics><mi>Δ</mi> <annotation>$\\\\Delta$</annotation></semantics> </math> -Fibernet works directly on the surface of the heart and includes a new approach to select the most reliable fibre direction. The method produces results in under 7 min and could support personalised treatment planning for heart rhythm disorders.</p>\",\"PeriodicalId\":50088,\"journal\":{\"name\":\"Journal of Physiology-London\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":4.4000,\"publicationDate\":\"2025-09-19\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Physiology-London\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.1113/JP288001\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"NEUROSCIENCES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Physiology-London","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1113/JP288001","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"NEUROSCIENCES","Score":null,"Total":0}
Ensemble learning of the atrial fibre orientation with physics-informed neural networks.
The anisotropic structure of the myocardium is a key determinant of the cardiac function. To date there is no imaging modality to assess in vivo the cardiac fibre structure. We recently proposed Fibernet, a method for the automatic identification of the anisotropic conduction - and thus fibres - in the atria from local electrical recordings. Fibernet uses cardiac activation as recorded during electroanatomical mappings to infer local conduction properties using physics-informed neural networks. In this work we extend Fibernet to cope with the uncertainty in the estimated fibre field. Specifically we use an ensemble of neural networks to produce multiple samples, all fitting the observed data, and compute posterior statistics. We also introduce a methodology to select the best fibre orientation members and define the input of the neural networks directly on the atrial surface. With these improvements we outperform the previous methodology in terms of fibre orientation error in eight different atrial anatomies. Currently our approach can estimate the fibre orientation and conduction velocities in under 7 min with quantified uncertainty, which opens the door to its application in clinical practice. We hope the proposed methodology will enable further personalisation of cardiac digital twins for precision medicine. KEY POINTS: The direction of heart muscle fibres strongly affects how electrical signals travel, but current imaging methods cannot measure these fibres inside the living atria. We improved our previous method (Fibernet) by introducing -Fibernet, which is more accurate and can estimate uncertainty in the results. -Fibernet works directly on the surface of the heart and includes a new approach to select the most reliable fibre direction. The method produces results in under 7 min and could support personalised treatment planning for heart rhythm disorders.
期刊介绍:
The Journal of Physiology publishes full-length original Research Papers and Techniques for Physiology, which are short papers aimed at disseminating new techniques for physiological research. Articles solicited by the Editorial Board include Perspectives, Symposium Reports and Topical Reviews, which highlight areas of special physiological interest. CrossTalk articles are short editorial-style invited articles framing a debate between experts in the field on controversial topics. Letters to the Editor and Journal Club articles are also published. All categories of papers are subjected to peer reivew.
The Journal of Physiology welcomes submitted research papers in all areas of physiology. Authors should present original work that illustrates new physiological principles or mechanisms. Papers on work at the molecular level, at the level of the cell membrane, single cells, tissues or organs and on systems physiology are all acceptable. Theoretical papers and papers that use computational models to further our understanding of physiological processes will be considered if based on experimentally derived data and if the hypothesis advanced is directly amenable to experimental testing. While emphasis is on human and mammalian physiology, work on lower vertebrate or invertebrate preparations may be suitable if it furthers the understanding of the functioning of other organisms including mammals.