Pratiksha Acharya, Mourine J Yegon, Christian Griebler, Simon Vitecek, Katrin Attermeyer
{"title":"不同的细菌群落与溪流中两种碎纸机产生的颗粒有关。","authors":"Pratiksha Acharya, Mourine J Yegon, Christian Griebler, Simon Vitecek, Katrin Attermeyer","doi":"10.1093/femsec/fiaf091","DOIUrl":null,"url":null,"abstract":"<p><p>Leaf litter decomposition is a vital ecosystem process in which macroinvertebrate-shredders produce substantial amounts of fine particulate organic matter (FPOM) via sloppy feeding and defecation, creating a substratum and substrate for microbial assemblages. However, microbial communities colonizing the shredder-produced FPOM are understudied compared to those in streams and on original leaves. Here, we investigated the bacterial community composition on shredder-produced FPOM in a laboratory experiment. We fed alder, beech, and maple leaves conditioned under oxic or anoxic conditions to Sericostoma (Insecta: Trichoptera) larvae. We collected shredded leaf particles and faecal pellets as shredder-produced FPOM at different times and examined their microbial communities using 16S rRNA amplicon sequencing. We hypothesized that shredder-produced FPOM types harbor diverse, distinct, and specialized microbial taxa in response to leaf species and conditioning. We found significantly higher alpha diversity on shredded leaves compared to faecal pellets. Microbial communities on faecal pellets differed from initial leaf communities and with anoxic and oxic conditioning. Bacterial communities developing on leaves were dominated by common leaf decomposers including Flavobacterium and Pseudomonas whereas faecal pellets harbored gut bacterial taxa including Acinetobacter and Carnobacterium. These results underline the importance of conditioning and shredder activity in shaping FPOM-attached bacterial communities, increasing bacterial diversity in stream ecosystems.</p>","PeriodicalId":12312,"journal":{"name":"FEMS microbiology ecology","volume":" ","pages":""},"PeriodicalIF":3.2000,"publicationDate":"2025-09-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12451447/pdf/","citationCount":"0","resultStr":"{\"title\":\"Distinct bacterial communities affiliated with two types of shredder-produced particles in streams.\",\"authors\":\"Pratiksha Acharya, Mourine J Yegon, Christian Griebler, Simon Vitecek, Katrin Attermeyer\",\"doi\":\"10.1093/femsec/fiaf091\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Leaf litter decomposition is a vital ecosystem process in which macroinvertebrate-shredders produce substantial amounts of fine particulate organic matter (FPOM) via sloppy feeding and defecation, creating a substratum and substrate for microbial assemblages. However, microbial communities colonizing the shredder-produced FPOM are understudied compared to those in streams and on original leaves. Here, we investigated the bacterial community composition on shredder-produced FPOM in a laboratory experiment. We fed alder, beech, and maple leaves conditioned under oxic or anoxic conditions to Sericostoma (Insecta: Trichoptera) larvae. We collected shredded leaf particles and faecal pellets as shredder-produced FPOM at different times and examined their microbial communities using 16S rRNA amplicon sequencing. We hypothesized that shredder-produced FPOM types harbor diverse, distinct, and specialized microbial taxa in response to leaf species and conditioning. We found significantly higher alpha diversity on shredded leaves compared to faecal pellets. Microbial communities on faecal pellets differed from initial leaf communities and with anoxic and oxic conditioning. Bacterial communities developing on leaves were dominated by common leaf decomposers including Flavobacterium and Pseudomonas whereas faecal pellets harbored gut bacterial taxa including Acinetobacter and Carnobacterium. These results underline the importance of conditioning and shredder activity in shaping FPOM-attached bacterial communities, increasing bacterial diversity in stream ecosystems.</p>\",\"PeriodicalId\":12312,\"journal\":{\"name\":\"FEMS microbiology ecology\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":3.2000,\"publicationDate\":\"2025-09-22\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12451447/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"FEMS microbiology ecology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1093/femsec/fiaf091\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"FEMS microbiology ecology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1093/femsec/fiaf091","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
Distinct bacterial communities affiliated with two types of shredder-produced particles in streams.
Leaf litter decomposition is a vital ecosystem process in which macroinvertebrate-shredders produce substantial amounts of fine particulate organic matter (FPOM) via sloppy feeding and defecation, creating a substratum and substrate for microbial assemblages. However, microbial communities colonizing the shredder-produced FPOM are understudied compared to those in streams and on original leaves. Here, we investigated the bacterial community composition on shredder-produced FPOM in a laboratory experiment. We fed alder, beech, and maple leaves conditioned under oxic or anoxic conditions to Sericostoma (Insecta: Trichoptera) larvae. We collected shredded leaf particles and faecal pellets as shredder-produced FPOM at different times and examined their microbial communities using 16S rRNA amplicon sequencing. We hypothesized that shredder-produced FPOM types harbor diverse, distinct, and specialized microbial taxa in response to leaf species and conditioning. We found significantly higher alpha diversity on shredded leaves compared to faecal pellets. Microbial communities on faecal pellets differed from initial leaf communities and with anoxic and oxic conditioning. Bacterial communities developing on leaves were dominated by common leaf decomposers including Flavobacterium and Pseudomonas whereas faecal pellets harbored gut bacterial taxa including Acinetobacter and Carnobacterium. These results underline the importance of conditioning and shredder activity in shaping FPOM-attached bacterial communities, increasing bacterial diversity in stream ecosystems.
期刊介绍:
FEMS Microbiology Ecology aims to ensure efficient publication of high-quality papers that are original and provide a significant contribution to the understanding of microbial ecology. The journal contains Research Articles and MiniReviews on fundamental aspects of the ecology of microorganisms in natural soil, aquatic and atmospheric habitats, including extreme environments, and in artificial or managed environments. Research papers on pure cultures and in the areas of plant pathology and medical, food or veterinary microbiology will be published where they provide valuable generic information on microbial ecology. Papers can deal with culturable and non-culturable forms of any type of microorganism: bacteria, archaea, filamentous fungi, yeasts, protozoa, cyanobacteria, algae or viruses. In addition, the journal will publish Perspectives, Current Opinion and Controversy Articles, Commentaries and Letters to the Editor on topical issues in microbial ecology.
- Application of ecological theory to microbial ecology
- Interactions and signalling between microorganisms and with plants and animals
- Interactions between microorganisms and their physicochemical enviornment
- Microbial aspects of biogeochemical cycles and processes
- Microbial community ecology
- Phylogenetic and functional diversity of microbial communities
- Evolutionary biology of microorganisms