{"title":"可塑金弧菌(Aurantivibrio plasticcivorans gen. nov., sp. nov.)和弱金弧菌(Aurantivibrio infirus sp. nov.)是一种生物可降解的塑料降解细菌,属于细胞弧菌科,分离自日本海岸。","authors":"Takamasa Miura, Rieko Kasaishi, Kohei Hidaka, Mamiko Shimamura, Moriyuki Hamada, Tomoyo Miyakawa, Yoko Kusuya, Yoshiyuki Ishitani, Shun'ichi Ishii, Yoko Furuno, Risa Yokoyama, Dai-Ichiro Kato, Asuka Arimoto, Kazuya Fukuda, Tatsuya Ueki, Kunifumi Tagawa, Yoshihito Uchino, Kei Kamino","doi":"10.1099/ijsem.0.006920","DOIUrl":null,"url":null,"abstract":"<p><p>Two Gram-stain-negative, aerobic, non-spore-forming, rod-shaped bacterial strains, designated 4NK60-0013<sup>T</sup> and 4NH20-0068<sup>T</sup>, were isolated from biodegradable plastic films immersed in the coastal waters of Japan. These strains showed the ability to degrade biodegradable plastics, poly(butylene succinate-<i>co</i>-adipate) (PBSA) and poly(<i>ε</i>-caprolactone). Phylogenetic analyses based on the 16S rRNA gene sequences revealed that strains 4NK60-0013<sup>T</sup> and 4NH20-0068<sup>T</sup> belong to the family <i>Cellvibrionaceae</i> in the order <i>Cellvibrionales</i> and are closely related to members of the genus <i>Gilvimarinus</i>. The species most closely related to strains 4NK60-0013<sup>T</sup> and 4NH20-0068<sup>T</sup> were <i>Gilvimarinus agarilyticus</i> M5c<sup>T</sup> and <i>Gilvimarinus polysaccharolyticus</i> YN3<sup>T</sup>, with 16S rRNA gene sequence similarities of 94.4 and 93.3%, respectively. The sequence similarity between the two novel strains was 94.8%, indicating that they represented separate species. The genome length and G+C content of the genome sequence of strain 4NK60-0013<sup>T</sup> were 4,354,061 bp and 46.9 mol%, respectively, whereas those of strain 4NH20-0068<sup>T</sup> were 4,154,637 bp and 43.3 mol%, respectively. The average nucleotide identity values between the strains were <72.0%, similar to the values between the strains and type strains of species from the genera <i>Cellvibrio</i>, <i>Gilvimarinus</i> and <i>Marinimicrobium</i>. Based on phenotypic, cellular fatty acid and phylogenetic characteristics, the two isolates represent novel species within a new genus of the family <i>Cellvibrionaceae</i>, for which the names <i>Aurantivibrio plasticivorans</i> gen. nov., sp. nov. (type species) and <i>Aurantivibrio infirmus</i> sp. nov. have been proposed. Additionally, these strains and other bacteria belonging to the family <i>Cellvibrionaceae</i> have been shown to biodegrade PBSA, a biodegradable plastic. The type strains of <i>A. plasticivorans</i> and <i>A. infirmus</i> are 4NK60-0013<sup>T</sup> (=NBRC 116180<sup>T</sup>=TBRC 19146<sup>T</sup>) and 4NH20-0068<sup>T</sup> (=NBRC 116181<sup>T</sup>=TBRC 19147<sup>T</sup>), respectively.</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":"75 9","pages":""},"PeriodicalIF":2.0000,"publicationDate":"2025-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"<i>Aurantivibrio plasticivorans</i> gen. nov., sp. nov. and <i>Aurantivibrio infirmus</i> sp. nov., biodegradable plastic-degrading bacteria belonging to the family <i>Cellvibrionaceae</i>, isolated from the coast of Japan.\",\"authors\":\"Takamasa Miura, Rieko Kasaishi, Kohei Hidaka, Mamiko Shimamura, Moriyuki Hamada, Tomoyo Miyakawa, Yoko Kusuya, Yoshiyuki Ishitani, Shun'ichi Ishii, Yoko Furuno, Risa Yokoyama, Dai-Ichiro Kato, Asuka Arimoto, Kazuya Fukuda, Tatsuya Ueki, Kunifumi Tagawa, Yoshihito Uchino, Kei Kamino\",\"doi\":\"10.1099/ijsem.0.006920\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Two Gram-stain-negative, aerobic, non-spore-forming, rod-shaped bacterial strains, designated 4NK60-0013<sup>T</sup> and 4NH20-0068<sup>T</sup>, were isolated from biodegradable plastic films immersed in the coastal waters of Japan. These strains showed the ability to degrade biodegradable plastics, poly(butylene succinate-<i>co</i>-adipate) (PBSA) and poly(<i>ε</i>-caprolactone). Phylogenetic analyses based on the 16S rRNA gene sequences revealed that strains 4NK60-0013<sup>T</sup> and 4NH20-0068<sup>T</sup> belong to the family <i>Cellvibrionaceae</i> in the order <i>Cellvibrionales</i> and are closely related to members of the genus <i>Gilvimarinus</i>. The species most closely related to strains 4NK60-0013<sup>T</sup> and 4NH20-0068<sup>T</sup> were <i>Gilvimarinus agarilyticus</i> M5c<sup>T</sup> and <i>Gilvimarinus polysaccharolyticus</i> YN3<sup>T</sup>, with 16S rRNA gene sequence similarities of 94.4 and 93.3%, respectively. The sequence similarity between the two novel strains was 94.8%, indicating that they represented separate species. The genome length and G+C content of the genome sequence of strain 4NK60-0013<sup>T</sup> were 4,354,061 bp and 46.9 mol%, respectively, whereas those of strain 4NH20-0068<sup>T</sup> were 4,154,637 bp and 43.3 mol%, respectively. The average nucleotide identity values between the strains were <72.0%, similar to the values between the strains and type strains of species from the genera <i>Cellvibrio</i>, <i>Gilvimarinus</i> and <i>Marinimicrobium</i>. Based on phenotypic, cellular fatty acid and phylogenetic characteristics, the two isolates represent novel species within a new genus of the family <i>Cellvibrionaceae</i>, for which the names <i>Aurantivibrio plasticivorans</i> gen. nov., sp. nov. (type species) and <i>Aurantivibrio infirmus</i> sp. nov. have been proposed. Additionally, these strains and other bacteria belonging to the family <i>Cellvibrionaceae</i> have been shown to biodegrade PBSA, a biodegradable plastic. The type strains of <i>A. plasticivorans</i> and <i>A. infirmus</i> are 4NK60-0013<sup>T</sup> (=NBRC 116180<sup>T</sup>=TBRC 19146<sup>T</sup>) and 4NH20-0068<sup>T</sup> (=NBRC 116181<sup>T</sup>=TBRC 19147<sup>T</sup>), respectively.</p>\",\"PeriodicalId\":14390,\"journal\":{\"name\":\"International journal of systematic and evolutionary microbiology\",\"volume\":\"75 9\",\"pages\":\"\"},\"PeriodicalIF\":2.0000,\"publicationDate\":\"2025-09-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"International journal of systematic and evolutionary microbiology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1099/ijsem.0.006920\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"International journal of systematic and evolutionary microbiology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1099/ijsem.0.006920","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
Aurantivibrio plasticivorans gen. nov., sp. nov. and Aurantivibrio infirmus sp. nov., biodegradable plastic-degrading bacteria belonging to the family Cellvibrionaceae, isolated from the coast of Japan.
Two Gram-stain-negative, aerobic, non-spore-forming, rod-shaped bacterial strains, designated 4NK60-0013T and 4NH20-0068T, were isolated from biodegradable plastic films immersed in the coastal waters of Japan. These strains showed the ability to degrade biodegradable plastics, poly(butylene succinate-co-adipate) (PBSA) and poly(ε-caprolactone). Phylogenetic analyses based on the 16S rRNA gene sequences revealed that strains 4NK60-0013T and 4NH20-0068T belong to the family Cellvibrionaceae in the order Cellvibrionales and are closely related to members of the genus Gilvimarinus. The species most closely related to strains 4NK60-0013T and 4NH20-0068T were Gilvimarinus agarilyticus M5cT and Gilvimarinus polysaccharolyticus YN3T, with 16S rRNA gene sequence similarities of 94.4 and 93.3%, respectively. The sequence similarity between the two novel strains was 94.8%, indicating that they represented separate species. The genome length and G+C content of the genome sequence of strain 4NK60-0013T were 4,354,061 bp and 46.9 mol%, respectively, whereas those of strain 4NH20-0068T were 4,154,637 bp and 43.3 mol%, respectively. The average nucleotide identity values between the strains were <72.0%, similar to the values between the strains and type strains of species from the genera Cellvibrio, Gilvimarinus and Marinimicrobium. Based on phenotypic, cellular fatty acid and phylogenetic characteristics, the two isolates represent novel species within a new genus of the family Cellvibrionaceae, for which the names Aurantivibrio plasticivorans gen. nov., sp. nov. (type species) and Aurantivibrio infirmus sp. nov. have been proposed. Additionally, these strains and other bacteria belonging to the family Cellvibrionaceae have been shown to biodegrade PBSA, a biodegradable plastic. The type strains of A. plasticivorans and A. infirmus are 4NK60-0013T (=NBRC 116180T=TBRC 19146T) and 4NH20-0068T (=NBRC 116181T=TBRC 19147T), respectively.
期刊介绍:
Published by the Microbiology Society and owned by the International Committee on Systematics of Prokaryotes (ICSP), a committee of the Bacteriology and Applied Microbiology Division of the International Union of Microbiological Societies, International Journal of Systematic and Evolutionary Microbiology is the leading forum for the publication of novel microbial taxa and the ICSP’s official journal of record for prokaryotic names.
The journal welcomes high-quality research on all aspects of microbial evolution, phylogenetics and systematics, encouraging submissions on all prokaryotes, yeasts, microfungi, protozoa and microalgae across the full breadth of systematics including:
Identification, characterisation and culture preservation
Microbial evolution and biodiversity
Molecular environmental work with strong taxonomic or evolutionary content
Nomenclature
Taxonomy and phylogenetics.