快速VPCR与核酸侧流免疫分析法(NALFIA)联合快速检测假中间葡萄球菌和凝固葡萄球菌。

IF 1.9 4区 生物学 Q4 BIOCHEMICAL RESEARCH METHODS
Ananda Chitra Murugesan, Kaviya Karthikeyan, Nivedita Jeyaraja, Pavithraa Damodaran, Karthik Raj Bodepogu Nandagopal, Anju Anil, Tirumurugaan Krishnaswamy Gopalan
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引用次数: 0

摘要

在狗身上,脓皮病主要由凝固酶阳性的假中间葡萄球菌(SP)、凝固葡萄球菌(SC)和金黄色葡萄球菌(SA)引起。鉴别这些生物的标准培养和生化方法是费力的,并且有可能出现鉴别错误。分子方法,如PCR,是早期和准确诊断这些生物的可行替代方法。本研究收集了83例犬脓皮病拭子样本,比较了常规琼脂糖凝胶电泳快速VPCR与核酸侧流免疫分析法(NALFIA)检测SP和SC的敏感性和特异性。采用简单快速的NaOH裂解法提取细菌DNA。PCR中以SC的rodA基因和SP的spsK基因为引物,NALFIA中以相同基因的标记引物为引物。凝胶电泳VPCR检测SP和SC的限为102 CFU/ml, NALFIA的限为104 CFU/ml。虽然发现凝胶电泳的VPCR比NALFIA更敏感,但它需要专门的设备,如带有电源包和凝胶记录系统的琼脂糖凝胶电泳仪和致癌的溴化乙啶染料来检测琼脂糖凝胶中的条带。VPCR与NALFIA相结合,在45 min内对这些细菌进行敏感可靠的检测,甚至肉眼也能检测到。NALFIA的简单性、可移植性和成本效益使其特别适用于资源有限的环境和护理点测试。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Rapid detection of Staphylococcus pseudintermedius and Staphylococcus coagulans by combining fast VPCR with nucleic acid lateral flow immunoassay (NALFIA)
In dogs, pyoderma is primarily caused by coagulase-positive Staphylococcus pseudintermedius (SP), S. coagulans (SC) and S. aureus (SA). Standard culture and biochemical methods for identifying these organisms are laborious, and potential misidentification is a possibility. Molecular methods, like PCR, are a viable alternative for early and accurate diagnosis of these organisms. In this study, we collected 83 swab samples from pyoderma cases of dogs and compared the sensitivity and specificity of the fast VPCR in conventional agarose gel electrophoresis with Nucleic Acid Lateral Flow Immunoassay (NALFIA) in detecting SP and SC. Bacterial DNA was extracted by a simple and quick NaOH lysis method. Primers targeting the rodA gene of SC and the spsK gene of SP were used in PCR, and labelled primers of the same genes were used in NALFIA. The limit of detection of SP and SC in VPCR with gel electrophoresis was 102 CFU/ml and 104 CFU/ml for NALFIA. Though VPCR with gel electrophoresis was found to be more sensitive than NALFIA, it required specialized equipment like agarose gel electrophoretic apparatus with power pack and gel documentation system and carcinogenic ethidium bromide dye for detection of the bands in agarose gel. The VPCR, combined with NALFIA, offers sensitive and reliable detection of these bacteria in 45 min, even to the naked eye. The simplicity, portability, and cost-effectiveness of the NALFIA make them particularly suitable for resource-limited settings and point-of-care testing.
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来源期刊
Journal of microbiological methods
Journal of microbiological methods 生物-生化研究方法
CiteScore
4.30
自引率
4.50%
发文量
151
审稿时长
29 days
期刊介绍: The Journal of Microbiological Methods publishes scholarly and original articles, notes and review articles. These articles must include novel and/or state-of-the-art methods, or significant improvements to existing methods. Novel and innovative applications of current methods that are validated and useful will also be published. JMM strives for scholarship, innovation and excellence. This demands scientific rigour, the best available methods and technologies, correctly replicated experiments/tests, the inclusion of proper controls, calibrations, and the correct statistical analysis. The presentation of the data must support the interpretation of the method/approach. All aspects of microbiology are covered, except virology. These include agricultural microbiology, applied and environmental microbiology, bioassays, bioinformatics, biotechnology, biochemical microbiology, clinical microbiology, diagnostics, food monitoring and quality control microbiology, microbial genetics and genomics, geomicrobiology, microbiome methods regardless of habitat, high through-put sequencing methods and analysis, microbial pathogenesis and host responses, metabolomics, metagenomics, metaproteomics, microbial ecology and diversity, microbial physiology, microbial ultra-structure, microscopic and imaging methods, molecular microbiology, mycology, novel mathematical microbiology and modelling, parasitology, plant-microbe interactions, protein markers/profiles, proteomics, pyrosequencing, public health microbiology, radioisotopes applied to microbiology, robotics applied to microbiological methods,rumen microbiology, microbiological methods for space missions and extreme environments, sampling methods and samplers, soil and sediment microbiology, transcriptomics, veterinary microbiology, sero-diagnostics and typing/identification.
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