[牙线生物样本采集,DNA提取和STR分型]。

Q3 Medicine
Ze-Qin Li, Fang Yuan, Na Liu, Jiang-Wei Yan, Geng-Qian Zhang
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引用次数: 0

摘要

目的:通过分析牙线样本采集方法、DNA提取方法、保存条件、采样地点对STR分型成功率的影响,评价使用过的牙线作为个体鉴定生物证据来源的法医应用价值。方法:采用直接切割法、棉签擦拭法和蜂群擦拭法采集牙线标本。分别采用Chelex法、自旋柱法和磁珠法提取DNA。分别使用Qubit试剂盒和FGI HumDNA分型试剂盒(Platinum)进行DNA定量和STR分型。评价贮藏环境(温湿度、紫外线)和取样地点(牙线部分、把手部分)对DNA含量和STR分型的影响。结果:通过对平均DNA质量浓度、STR位点检出率、分型准确率三个关键指标的统计分析,直接切割法的效果最高,其次是棉签擦拭法,棉签擦拭法的效果最低。直接切割的平均DNA质量浓度大于(4.94±1.87)ng/μL, STR位点检测准确率为100%。无论采用何种取样技术,基于珠的DNA提取方法都比基于自旋柱和Chelex的方法产生更高的DNA浓度和质量。保存条件对样品的DNA分析有重要影响。其中,55℃/50%RH保存35 d的STR分型准确率降至(81.82±12.31)%,紫外线照射12 h的STR分型准确率降至(55.46±34.31)%。牙线柄部DNA浓度极低,STR分型准确率仅为(30.91±27.35)%。结论:用棉签擦拭或直接剪断牙线样品的线,并结合磁珠法提取DNA,最能保证DNA的浓度和质量。另外,样品应保存在低温、低湿、避光和紫外线的环境中。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
[Dental Floss-derived Biological Sample Collection, DNA Extraction and STR Typing].

Objectives: To evaluate the forensic application value of used dental floss as a source of biological evidence for individual identification by analyzing the effects of dental floss sample collection methods, DNA extraction methods, preservation conditions, and sampling sites on the success rate of STR typing.

Methods: Dental floss samples were collected using three techniques: direct cutting, cotton swab wiping, and flocked swab wiping, respectively. DNA was extracted respectively by the Chelex, spin column-based and magnetic bead-based methods. DNA quantification and STR typing were performed using the Qubit kit and FGI HumDNA Typing kit (Platinum), respectively. Storage environments (temperature and humidity, ultraviolet radiation) and sampling locations (the floss part, the handle part) on DNA quantity and STR typing were evaluated.

Results: Through conducting a statistical analysis of three key indicators of average DNA mass concentration, STR locus detection rate, and typing accuracy rate, the direct cutting method demonstrated the highest efficacy, followed by cotton swab wiping mothed, and the flocked swab wiping method had the lowest efficacy. Direct cutting yielded an average DNA mass concentration greater than (4.94±1.87) ng/μL, with STR locus detection and accuracy rates of 100%. Bead-based DNA extraction method produced superior DNA concentration and quality compared to spin column-based and Chelex methods, regardless of whether the sampling technique used. Preservation conditions had a significant impact on the DNA analysis of samples. Particularly, the STR typing accuracy of samples preserved at 55 ℃/50%RH for 35 days dropped to (81.82±12.31)%, and that of samples exposed to ultraviolet radiation for 12 h dropped to (55.46±34.31)%. DNA concentration from the handle part of dental floss was extremely low, with an STR typing accuracy of only (30.91±27.35)%.

Conclusions: Using cotton swabs to wipe or directly cutting the thread of dental floss samples, and combining this approach with the magnetic bead method for DNA extraction, can best guarantee the concentration and quality of DNA. In addition, samples should be stored in low-temperature, low-humidity environment, protected from light and ultraviolet radiation.

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来源期刊
法医学杂志
法医学杂志 Medicine-Pathology and Forensic Medicine
CiteScore
1.50
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