注释脊椎动物横纹肌的x射线衍射图。

IF 3.1 3区 生物学 Q2 BIOPHYSICS
Natalia A Koubassova, Debabrata Dutta, Weikang Ma, Andrey K Tsaturyan, Thomas Irving, Raúl Padrón, Roger Craig
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引用次数: 0

摘要

低角x射线衍射是原位分析横纹肌肌丝分子结构的有力技术。它极大地促进了我们对骨骼肌和心肌粗丝中肌球蛋白头的松弛,430-Å-repeating组织的理解。利用x射线衍射,可以在Å长度尺度和毫秒时间尺度上检测到细丝结构的变化,从而建立模型,为我们理解收缩的结构基础奠定基础。与所有的x射线光纤衍射研究一样,解释需要建模,而以前的建模是基于粗灯丝结构的低分辨率知识,并且由于多个灯丝组分对大多数x射线反射的贡献而变得复杂。在这里,我们使用了一个人类心脏厚丝c区原子模型,该模型是在肌凝蛋白抑制剂mavacamten存在的情况下由低温电镜导出的,通过在计算中包括/排除这些成分,客观地计算了肌凝蛋白头、尾、titin和cMyBP-C对衍射图案的贡献。我们的结果支持先前的一些解释,但与其他解释相矛盾。我们证实肌凝蛋白头负责肌凝蛋白层线上的大部分强度,包括M3子午线。与预期相反,我们发现肌凝蛋白尾部对该模式贡献不大,包括M6子午;这种反射主要来自头部和其他部件。M11层线(39 Å间距)主要来自titin的弯曲和扭结结构,它允许11 ~ 42个-Å-long结构域适合430 Å重复序列。M11间距可以用作肌凝蛋白丝主干应变的测量,因为头部的贡献可以忽略不计。计算的层线很好地解释了实验确定的模式。这些见解将有助于未来了解完整肌肉在不同条件下的x线图,如收缩和药物治疗。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Annotating the x-ray diffraction pattern of vertebrate striated muscle.

Low-angle x-ray diffraction is a powerful technique for analyzing the molecular structure of the myofilaments of striated muscle in situ. It has contributed greatly to our understanding of the relaxed, 430-Å repeating organization of myosin heads in thick filaments in skeletal and cardiac muscle. Using x-ray diffraction, changes in filament structure can be detected on the angstrom length scale and millisecond timescale, leading to models that are the foundation of our understanding of the structural basis of contraction. As with all x-ray fiber diffraction studies, interpretation requires modeling, which has previously been based on low-resolution knowledge of thick filament structure and is complicated by the contributions of multiple filament components to most x-ray reflections. Here, we use an atomic model of the human cardiac thick filament C-zone, derived from cryo-EM in the presence of the myosin inhibitor, mavacamten, to compute objectively the contributions of myosin heads, tails, titin, and cMyBP-C to the diffraction pattern, by including/excluding these components in the calculations. Our results support some previous interpretations but contradict others. We confirm that the myosin heads are responsible for most of the intensity on the myosin layer lines, including the M3 meridional. Contrary to expectation, we find that myosin tails contribute little to the pattern, including the M6 meridional; this reflection arises mainly from heads and other components. The M11 layer line (39-Å spacing) arises mostly from the curved and kinked structure of titin, which allows 11 ∼42-Å-long domains to fit into the 430-Å repeat. The M11 spacing can be used as a measure of strain in the myosin filament backbone as there is negligible head contribution. The computed layer lines account well for the experimentally determined pattern. These insights should aid future understanding of the x-ray pattern of intact muscle in different conditions such as contraction and drug treatment.

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来源期刊
Biophysical journal
Biophysical journal 生物-生物物理
CiteScore
6.10
自引率
5.90%
发文量
3090
审稿时长
2 months
期刊介绍: BJ publishes original articles, letters, and perspectives on important problems in modern biophysics. The papers should be written so as to be of interest to a broad community of biophysicists. BJ welcomes experimental studies that employ quantitative physical approaches for the study of biological systems, including or spanning scales from molecule to whole organism. Experimental studies of a purely descriptive or phenomenological nature, with no theoretical or mechanistic underpinning, are not appropriate for publication in BJ. Theoretical studies should offer new insights into the understanding ofexperimental results or suggest new experimentally testable hypotheses. Articles reporting significant methodological or technological advances, which have potential to open new areas of biophysical investigation, are also suitable for publication in BJ. Papers describing improvements in accuracy or speed of existing methods or extra detail within methods described previously are not suitable for BJ.
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