Khadijeh Rihai Rad , Alireza Babaei , Mahmoud Kiani , Daniel Potter , Hamidreza Ardalani
{"title":"代谢组指纹图谱分析了天门冬科鸟类、Loncomelos和Melomphis的化学多样性","authors":"Khadijeh Rihai Rad , Alireza Babaei , Mahmoud Kiani , Daniel Potter , Hamidreza Ardalani","doi":"10.1016/j.bse.2025.105121","DOIUrl":null,"url":null,"abstract":"<div><div>This research employed GC-MS metabolomics profiling on bulbs of three genera i.e., <em>Ornithogalum</em>, <em>Loncomelos</em>, and <em>Melomphis</em> (Asparagaceae), to elucidate their taxonomic relationships. The analysis of 30 specimens across 8 species (<em>Ornithogalum</em> comprising 3 species: <em>O. cuspidatum</em>, <em>O. neurostegium</em>, <em>O. orthophyllum</em>; <em>Loncomelos</em> including 4 species: <em>L. arcuatum</em>, <em>L. brachystachys</em>, <em>L. bungei</em>, <em>L. kurdicum</em>; and <em>Melomphis persica</em>) from Iran revealed 147 detected metabolites, classified in several main superclasses e.g., organic oxygen compounds (40 %), organic acids (23 %), and lipids (18 %). Additionally, the metabolites were grouped into classes, with carbohydrates comprising the majority (42 %), followed by carboxylic acids (17 %) and fatty acids (14 %). Multivariate statistics including the variable importance in projection, and hierarchical clustering heat map discerned metabolites differentiating the genera. Projections to latent structures discriminant analysis revealed that <em>Ornithogalum</em> exhibited significant metabolic divergence from the closely related taxa <em>Loncomelos</em> and <em>Melomphis</em>, aligning with their established phylogenetic divisions. Overall, this work significantly expands knowledge of the chemodiversity of these taxa. The findings provide a phylogenetic framework to guide further ethno-pharmacological, phytochemical, and evolutionary research on these geophyte taxa.</div></div>","PeriodicalId":8799,"journal":{"name":"Biochemical Systematics and Ecology","volume":"124 ","pages":"Article 105121"},"PeriodicalIF":2.0000,"publicationDate":"2025-09-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Metabolome fingerprinting elucidates chemodiversity in Ornithogalum, Loncomelos, and Melomphis (Asparagaceae)\",\"authors\":\"Khadijeh Rihai Rad , Alireza Babaei , Mahmoud Kiani , Daniel Potter , Hamidreza Ardalani\",\"doi\":\"10.1016/j.bse.2025.105121\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>This research employed GC-MS metabolomics profiling on bulbs of three genera i.e., <em>Ornithogalum</em>, <em>Loncomelos</em>, and <em>Melomphis</em> (Asparagaceae), to elucidate their taxonomic relationships. The analysis of 30 specimens across 8 species (<em>Ornithogalum</em> comprising 3 species: <em>O. cuspidatum</em>, <em>O. neurostegium</em>, <em>O. orthophyllum</em>; <em>Loncomelos</em> including 4 species: <em>L. arcuatum</em>, <em>L. brachystachys</em>, <em>L. bungei</em>, <em>L. kurdicum</em>; and <em>Melomphis persica</em>) from Iran revealed 147 detected metabolites, classified in several main superclasses e.g., organic oxygen compounds (40 %), organic acids (23 %), and lipids (18 %). Additionally, the metabolites were grouped into classes, with carbohydrates comprising the majority (42 %), followed by carboxylic acids (17 %) and fatty acids (14 %). Multivariate statistics including the variable importance in projection, and hierarchical clustering heat map discerned metabolites differentiating the genera. Projections to latent structures discriminant analysis revealed that <em>Ornithogalum</em> exhibited significant metabolic divergence from the closely related taxa <em>Loncomelos</em> and <em>Melomphis</em>, aligning with their established phylogenetic divisions. Overall, this work significantly expands knowledge of the chemodiversity of these taxa. The findings provide a phylogenetic framework to guide further ethno-pharmacological, phytochemical, and evolutionary research on these geophyte taxa.</div></div>\",\"PeriodicalId\":8799,\"journal\":{\"name\":\"Biochemical Systematics and Ecology\",\"volume\":\"124 \",\"pages\":\"Article 105121\"},\"PeriodicalIF\":2.0000,\"publicationDate\":\"2025-09-11\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Biochemical Systematics and Ecology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S030519782500170X\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biochemical Systematics and Ecology","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S030519782500170X","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
Metabolome fingerprinting elucidates chemodiversity in Ornithogalum, Loncomelos, and Melomphis (Asparagaceae)
This research employed GC-MS metabolomics profiling on bulbs of three genera i.e., Ornithogalum, Loncomelos, and Melomphis (Asparagaceae), to elucidate their taxonomic relationships. The analysis of 30 specimens across 8 species (Ornithogalum comprising 3 species: O. cuspidatum, O. neurostegium, O. orthophyllum; Loncomelos including 4 species: L. arcuatum, L. brachystachys, L. bungei, L. kurdicum; and Melomphis persica) from Iran revealed 147 detected metabolites, classified in several main superclasses e.g., organic oxygen compounds (40 %), organic acids (23 %), and lipids (18 %). Additionally, the metabolites were grouped into classes, with carbohydrates comprising the majority (42 %), followed by carboxylic acids (17 %) and fatty acids (14 %). Multivariate statistics including the variable importance in projection, and hierarchical clustering heat map discerned metabolites differentiating the genera. Projections to latent structures discriminant analysis revealed that Ornithogalum exhibited significant metabolic divergence from the closely related taxa Loncomelos and Melomphis, aligning with their established phylogenetic divisions. Overall, this work significantly expands knowledge of the chemodiversity of these taxa. The findings provide a phylogenetic framework to guide further ethno-pharmacological, phytochemical, and evolutionary research on these geophyte taxa.
期刊介绍:
Biochemical Systematics and Ecology is devoted to the publication of original papers and reviews, both submitted and invited, in two subject areas: I) the application of biochemistry to problems relating to systematic biology of organisms (biochemical systematics); II) the role of biochemistry in interactions between organisms or between an organism and its environment (biochemical ecology).
In the Biochemical Systematics subject area, comparative studies of the distribution of (secondary) metabolites within a wider taxon (e.g. genus or family) are welcome. Comparative studies, encompassing multiple accessions of each of the taxa within their distribution are particularly encouraged. Welcome are also studies combining classical chemosystematic studies (such as comparative HPLC-MS or GC-MS investigations) with (macro-) molecular phylogenetic studies. Studies that involve the comparative use of compounds to help differentiate among species such as adulterants or substitutes that illustrate the applied use of chemosystematics are welcome. In contrast, studies solely employing macromolecular phylogenetic techniques (gene sequences, RAPD studies etc.) will be considered out of scope. Discouraged are manuscripts that report known or new compounds from a single source taxon without addressing a systematic hypothesis. Also considered out of scope are studies using outdated and hard to reproduce macromolecular techniques such as RAPDs in combination with standard chemosystematic techniques such as GC-FID and GC-MS.