x射线衍射分析热放线菌羧基肽酶T对底物识别的作用

IF 0.5 4区 材料科学 Q4 CRYSTALLOGRAPHY
V. Kh. Akparov, V. I. Timofeev, G. E. Konstantinova, I. P. Kuranova
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引用次数: 0

摘要

羧基肽酶T L254N突变体与稳定过渡态类似物(如磺胺酰谷氨酸、n -磺胺酰精氨酸、n -磺胺酰l-缬氨酸和n -磺胺酰l-亮氨酸)配合物的晶体结构分别在2.05、1.89、2.30和1.79 Å分辨率下测定。这些抑制剂的结合常数和相应的三肽底物ZAAX的催化效率取决于配体的О15、О16、О20和Т19原子与突变蛋白的活性位点残基N146、Y225和E277之间的距离。这种依赖性与野生型羧肽酶T的依赖性明显不同。这些结果表明,金属羧肽酶柔性环上的亮氨酸254通过诱导配合机制参与了羧肽酶T对底物的识别。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Role of the Residue L254 in the Substrate Recognition by Carboxypeptidase T from Thermoactinomyces Vulgaris Revealed by X-Ray Diffraction

Role of the Residue L254 in the Substrate Recognition by Carboxypeptidase T from Thermoactinomyces Vulgaris Revealed by X-Ray Diffraction

Role of the Residue L254 in the Substrate Recognition by Carboxypeptidase T from Thermoactinomyces Vulgaris Revealed by X-Ray Diffraction

The crystal structures of the L254N mutant of carboxypeptidase T in complexes with stable transition state analogs, such as sulfamoyl-L-glutamate, N-sulfamoyl-L-arginine, N-sulfamoyl-L-valine, and N-sulfamoyl-L-leucine, were determined at 2.05, 1.89, 2.30, and 1.79 Å resolution, respectively. The association constants of these inhibitors and the catalytic efficiency of the corresponding tripeptide substrates ZAAX were found to depend on the distances between the О15, О16, О20, and Т19 atoms of the ligand and the active-site residues N146, Y225, and E277 of the mutant protein. This dependence significantly differs from that found previously for wild-type carboxypeptidase T. These results demonstrate that leucine 254 of the flexible loop of metallocarboxypeptidases is involved in the substrate discrimination by carboxypeptidase T via the induced-fit mechanism.

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来源期刊
Crystallography Reports
Crystallography Reports 化学-晶体学
CiteScore
1.10
自引率
28.60%
发文量
96
审稿时长
4-8 weeks
期刊介绍: Crystallography Reports is a journal that publishes original articles short communications, and reviews on various aspects of crystallography: diffraction and scattering of X-rays, electrons, and neutrons, determination of crystal structure of inorganic and organic substances, including proteins and other biological substances; UV-VIS and IR spectroscopy; growth, imperfect structure and physical properties of crystals; thin films, liquid crystals, nanomaterials, partially disordered systems, and the methods of studies.
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