在河北省男男性行为人群中首次发现一种新的HIV-1 CRF80_0107/B重组形式

IF 1.1 4区 医学 Q4 IMMUNOLOGY
Zhen Zhang, Jingwei Sun, Huijuan Yang, Haoxi Shi, Sisi Chen, Jianru Jia, Weiguang Fan
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引用次数: 0

摘要

CRF80_0107的出现源于共循环CRF01_AE和CRF07_BC基因型的重组。到目前为止,在公共序列数据库中还没有记录到以CRF80_0107为亲本菌株的二次重组。在这里,我们报告了从中国河北省保定市treatment-naïve男男性行为者(MSM)个体中分离的一种新的HIV-1 CRF80_0107/B重组形式的鉴定和特征。近全长基因组的系统发育分析显示与CRF80_0107谱系聚类,Bootscan和相似图谱分析(RIP 3.0)鉴定了一个包含插入的B亚型片段的重组结构,该结构跨越env, nef和3'LTR区域(HXB2: 7,907-9,342 nt)。这是中国北方MSM人群中首次记录的CRF80_0107/B菌株,强调了扩大分子监测以跟踪这一关键人群中HIV-1多样性进化的必要性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
First Identification of a Novel HIV-1 CRF80_0107/B Recombinant Form Among Men Who Have Sex with Men in Hebei Province, China.

The emergence of CRF80_0107 resulted from recombination between co-circulating CRF01_AE and CRF07_BC genotypes. To date, no secondary recombinants involving CRF80_0107 as a parental strain have been documented in public sequence databases. Here, we report the identification and characterization of a novel HIV-1 CRF80_0107/B recombinant form isolated from a treatment-naïve men who have sex with men (MSM) individual in Baoding City, Hebei Province, China. While phylogenetic analysis of the near-full-length genome revealed clustering with the CRF80_0107 lineage, Bootscan and similarity-mapping analyses (RIP 3.0) identified a recombinant structure containing inserted B subtype fragments spanning the env, nef, and 3'LTR regions (HXB2: 7,907-9,342 nt). This represents the first documented CRF80_0107/B strain in the MSM population of northern China, highlighting the need for expanded molecular surveillance to track evolving HIV-1 diversity in this key population.

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来源期刊
CiteScore
3.10
自引率
6.70%
发文量
201
审稿时长
3-6 weeks
期刊介绍: AIDS Research and Human Retroviruses was the very first AIDS publication in the field over 30 years ago, and today it is still the critical resource advancing research in retroviruses, including AIDS. The Journal provides the broadest coverage from molecular biology to clinical studies and outcomes research, focusing on developments in prevention science, novel therapeutics, and immune-restorative approaches. Cutting-edge papers on the latest progress and research advances through clinical trials and examination of targeted antiretroviral agents lead to improvements in translational medicine for optimal treatment outcomes. AIDS Research and Human Retroviruses coverage includes: HIV cure research HIV prevention science - Vaccine research - Systemic and Topical PreP Molecular and cell biology of HIV and SIV Developments in HIV pathogenesis and comorbidities Molecular biology, immunology, and epidemiology of HTLV Pharmacology of HIV therapy Social and behavioral science Rapid publication of emerging sequence information.
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