通过集成量子化学计算和从超选择性核磁共振技术获得的空间构象信息,增强非对映异构体混合物分析

IF 2.7 3区 农林科学 Q3 FOOD SCIENCE & TECHNOLOGY
Miyeon Bang, Jin Wook Cha
{"title":"通过集成量子化学计算和从超选择性核磁共振技术获得的空间构象信息,增强非对映异构体混合物分析","authors":"Miyeon Bang,&nbsp;Jin Wook Cha","doi":"10.1186/s13765-025-01030-9","DOIUrl":null,"url":null,"abstract":"<div><p>Nuclear Magnetic Resonance (NMR) spectroscopy has become indispensable for elucidating molecular structures in pharmaceutical and natural product chemistry, where precise stereochemical configurations critically determine biological activities and therapeutic efficacy. We present an integrated methodology combining ultraselective NMR techniques (GEMSTONE and UHPT) with quantum chemical calculations to analyze iprovalicarb, a conformationally flexible diastereomeric mixture. By extracting detailed individual <i>J</i>-coupling and NOE data from mixture, we established spatio-conformational constraints that enabled systematic filtering of computationally generated conformers. This approach allowed precise identification of conformers consistent with experimental observations and accurate determination of <i>R/S</i> configurations without chemical derivatization or crystallization. ECD calculations on filtered conformers showed superior agreement with experimental measurements compared to unfiltered calculations, validating our approach. This methodology reduces resource requirements while improving structural analysis accuracy, offering applications in drug development and other field of chemistry for complex stereoisomeric systems.</p></div>","PeriodicalId":467,"journal":{"name":"Applied Biological Chemistry","volume":"68 1","pages":""},"PeriodicalIF":2.7000,"publicationDate":"2025-09-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://applbiolchem.springeropen.com/counter/pdf/10.1186/s13765-025-01030-9","citationCount":"0","resultStr":"{\"title\":\"Enhanced diastereomeric mixture analysis through integration of quantum chemical calculations with spatio-conformational information obtained from ultraselective NMR techniques\",\"authors\":\"Miyeon Bang,&nbsp;Jin Wook Cha\",\"doi\":\"10.1186/s13765-025-01030-9\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>Nuclear Magnetic Resonance (NMR) spectroscopy has become indispensable for elucidating molecular structures in pharmaceutical and natural product chemistry, where precise stereochemical configurations critically determine biological activities and therapeutic efficacy. We present an integrated methodology combining ultraselective NMR techniques (GEMSTONE and UHPT) with quantum chemical calculations to analyze iprovalicarb, a conformationally flexible diastereomeric mixture. By extracting detailed individual <i>J</i>-coupling and NOE data from mixture, we established spatio-conformational constraints that enabled systematic filtering of computationally generated conformers. This approach allowed precise identification of conformers consistent with experimental observations and accurate determination of <i>R/S</i> configurations without chemical derivatization or crystallization. ECD calculations on filtered conformers showed superior agreement with experimental measurements compared to unfiltered calculations, validating our approach. This methodology reduces resource requirements while improving structural analysis accuracy, offering applications in drug development and other field of chemistry for complex stereoisomeric systems.</p></div>\",\"PeriodicalId\":467,\"journal\":{\"name\":\"Applied Biological Chemistry\",\"volume\":\"68 1\",\"pages\":\"\"},\"PeriodicalIF\":2.7000,\"publicationDate\":\"2025-09-06\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://applbiolchem.springeropen.com/counter/pdf/10.1186/s13765-025-01030-9\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Applied Biological Chemistry\",\"FirstCategoryId\":\"97\",\"ListUrlMain\":\"https://link.springer.com/article/10.1186/s13765-025-01030-9\",\"RegionNum\":3,\"RegionCategory\":\"农林科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"FOOD SCIENCE & TECHNOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Applied Biological Chemistry","FirstCategoryId":"97","ListUrlMain":"https://link.springer.com/article/10.1186/s13765-025-01030-9","RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"FOOD SCIENCE & TECHNOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

核磁共振(NMR)波谱在阐明药物和天然产物化学中的分子结构方面已经成为不可或缺的,在这些领域中,精确的立体化学构型关键地决定了生物活性和治疗效果。我们提出了一种将超选择性核磁共振技术(GEMSTONE和UHPT)与量子化学计算相结合的综合方法来分析异丙利威,这是一种构象灵活的非对映体混合物。通过从混合物中提取详细的单个j -耦合和NOE数据,我们建立了空间构象约束,可以对计算生成的构象进行系统过滤。这种方法可以精确地识别与实验观察一致的构象,并在没有化学衍生化或结晶的情况下准确地确定R/S构型。与未过滤的计算相比,过滤后的构象的ECD计算结果与实验测量结果更加吻合,验证了我们的方法。该方法减少了资源需求,同时提高了结构分析的准确性,为复杂立体异构体系的药物开发和其他化学领域提供了应用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Enhanced diastereomeric mixture analysis through integration of quantum chemical calculations with spatio-conformational information obtained from ultraselective NMR techniques

Nuclear Magnetic Resonance (NMR) spectroscopy has become indispensable for elucidating molecular structures in pharmaceutical and natural product chemistry, where precise stereochemical configurations critically determine biological activities and therapeutic efficacy. We present an integrated methodology combining ultraselective NMR techniques (GEMSTONE and UHPT) with quantum chemical calculations to analyze iprovalicarb, a conformationally flexible diastereomeric mixture. By extracting detailed individual J-coupling and NOE data from mixture, we established spatio-conformational constraints that enabled systematic filtering of computationally generated conformers. This approach allowed precise identification of conformers consistent with experimental observations and accurate determination of R/S configurations without chemical derivatization or crystallization. ECD calculations on filtered conformers showed superior agreement with experimental measurements compared to unfiltered calculations, validating our approach. This methodology reduces resource requirements while improving structural analysis accuracy, offering applications in drug development and other field of chemistry for complex stereoisomeric systems.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Applied Biological Chemistry
Applied Biological Chemistry Chemistry-Organic Chemistry
CiteScore
5.40
自引率
6.20%
发文量
70
审稿时长
20 weeks
期刊介绍: Applied Biological Chemistry aims to promote the interchange and dissemination of scientific data among researchers in the field of agricultural and biological chemistry. The journal covers biochemistry and molecular biology, medical and biomaterial science, food science, and environmental science as applied to multidisciplinary agriculture.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信