{"title":"杉木叶绿体全基因组及其系统发育分析。","authors":"Chunfeng Wan, Dexin Wang, Xiaoqin Zhang, Hongling Liang, Junwei Zhang","doi":"10.1080/23802359.2025.2555460","DOIUrl":null,"url":null,"abstract":"<p><p><i>Coreopsis lanceolata</i> L. 1753 is a perennial herb of the family Asteraceae, often cultivated as an ornamental flower. The species has also been reported to contain a wide range of phytochemicals and to exhibit diverse pharmacological activities. To better understand the genetic information of <i>C. lanceolata</i>, its complete chloroplast genome was assembled and characterized for the first time in this study. The chloroplast genome was 150,448 bp long and contained 129 genes, including 86 protein-coding genes, 35 tRNA genes, and eight rRNA genes. A rearrangement involving double inversions was observed in the chloroplast genome when compared with that of <i>Barnadesia caryophylla</i>. Phylogenomic analysis indicated that <i>C. lanceolata</i>, <i>Bidens frondosa</i>, <i>B. tripartita</i>, and <i>B. pilosa</i> formed a monophyletic clade. The findings of this study provide support for future research on the evolution and potential pharmaceutical applications of this species.</p>","PeriodicalId":18647,"journal":{"name":"Mitochondrial DNA. Part B, Resources","volume":"10 10","pages":"899-903"},"PeriodicalIF":0.7000,"publicationDate":"2025-09-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12406329/pdf/","citationCount":"0","resultStr":"{\"title\":\"The complete chloroplast genome of <i>Coreopsis lanceolata</i> L. and its phylogenetic analysis.\",\"authors\":\"Chunfeng Wan, Dexin Wang, Xiaoqin Zhang, Hongling Liang, Junwei Zhang\",\"doi\":\"10.1080/23802359.2025.2555460\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p><i>Coreopsis lanceolata</i> L. 1753 is a perennial herb of the family Asteraceae, often cultivated as an ornamental flower. The species has also been reported to contain a wide range of phytochemicals and to exhibit diverse pharmacological activities. To better understand the genetic information of <i>C. lanceolata</i>, its complete chloroplast genome was assembled and characterized for the first time in this study. The chloroplast genome was 150,448 bp long and contained 129 genes, including 86 protein-coding genes, 35 tRNA genes, and eight rRNA genes. A rearrangement involving double inversions was observed in the chloroplast genome when compared with that of <i>Barnadesia caryophylla</i>. Phylogenomic analysis indicated that <i>C. lanceolata</i>, <i>Bidens frondosa</i>, <i>B. tripartita</i>, and <i>B. pilosa</i> formed a monophyletic clade. The findings of this study provide support for future research on the evolution and potential pharmaceutical applications of this species.</p>\",\"PeriodicalId\":18647,\"journal\":{\"name\":\"Mitochondrial DNA. Part B, Resources\",\"volume\":\"10 10\",\"pages\":\"899-903\"},\"PeriodicalIF\":0.7000,\"publicationDate\":\"2025-09-02\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12406329/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Mitochondrial DNA. Part B, Resources\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1080/23802359.2025.2555460\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2025/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"Q4\",\"JCRName\":\"GENETICS & HEREDITY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Mitochondrial DNA. Part B, Resources","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1080/23802359.2025.2555460","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/1/1 0:00:00","PubModel":"eCollection","JCR":"Q4","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
引用次数: 0
摘要
Coreopsis lanceolata L. 1753是一种菊科多年生草本植物,通常作为观赏花种植。据报道,该物种还含有广泛的植物化学物质,并表现出多种药理活性。为了更好地了解杉木的遗传信息,本研究首次对杉木叶绿体全基因组进行了组装和表征。叶绿体基因组长150,448 bp,包含129个基因,其中蛋白编码基因86个,tRNA基因35个,rRNA基因8个。与山核桃相比,在叶绿体基因组中观察到双倒位重排。系统基因组学分析表明,杉木、白针叶、三棱白针叶和毛蕊白针叶是一个单系分支。本研究结果为进一步研究该物种的进化和潜在的药物应用提供了支持。
The complete chloroplast genome of Coreopsis lanceolata L. and its phylogenetic analysis.
Coreopsis lanceolata L. 1753 is a perennial herb of the family Asteraceae, often cultivated as an ornamental flower. The species has also been reported to contain a wide range of phytochemicals and to exhibit diverse pharmacological activities. To better understand the genetic information of C. lanceolata, its complete chloroplast genome was assembled and characterized for the first time in this study. The chloroplast genome was 150,448 bp long and contained 129 genes, including 86 protein-coding genes, 35 tRNA genes, and eight rRNA genes. A rearrangement involving double inversions was observed in the chloroplast genome when compared with that of Barnadesia caryophylla. Phylogenomic analysis indicated that C. lanceolata, Bidens frondosa, B. tripartita, and B. pilosa formed a monophyletic clade. The findings of this study provide support for future research on the evolution and potential pharmaceutical applications of this species.
期刊介绍:
This open access journal publishes high-quality and concise research articles reporting the sequence of full mitochondrial genomes, and short communications focusing on the physical, chemical, and biochemical aspects of mtDNA and proteins involved in mtDNA metabolism and interactions.