基于bioid2的Tau相互作用组揭示了与多种细胞途径相关的新的和已知的蛋白质相互作用。

IF 3.6 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
Ahmed Atwa, , , Mohammed M. Alhadidy, , , Jared Lamp, , , Benjamin Combs, , and , Nicholas M. Kanaan*, 
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引用次数: 0

摘要

由tau组成的病理包涵体是称为tau病的神经退行性疾病的标志,其中最常见的是阿尔茨海默病。越来越多的证据表明,tau参与了多种生理功能,这些功能部分由直接和/或短暂的蛋白质相互作用调节。破译tau相互作用组对于理解tau的生理和病理作用至关重要。本工作旨在利用原位蛋白标记生物素鉴定(BioID2)方法鉴定潜在的tau相互作用物。这种方法的优点包括细胞内相互作用物标记和增强检测瞬时和/或弱相互作用的可能性。我们确定了324个潜在的tau相互作用因子,跨越多个细胞区室和途径。我们使用两种独立的方法验证了tau与选定候选蛋白的相互作用:邻近结扎试验和共免疫沉淀(co-IP),其中包括细胞骨架蛋白(MAP2和MAP6)、核相关蛋白(FUS和prune1)和突触蛋白(synapsin-1和neurabin-2)。重要的是,这种方法揭示了潜在的新型相互作用,而这些相互作用是其他相互作用方法(如co-IP)无法明确识别的。因此,这种方法是通过原位标记识别tau相互作用组潜在成员的有力工具。这项工作有助于扩大我们对tau生理作用的理解,这也可能促进我们对其在神经退行性疾病中的作用的理解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
BioID2-Based Tau Interactome Reveals Novel and Known Protein Interactions Associated with Multiple Cellular Pathways

Pathological inclusions composed of tau are hallmarks of neurodegenerative diseases termed tauopathies, the most common of which is Alzheimer’s disease. Accumulating evidence suggests that tau is involved in a multitude of physiological functions that are regulated, in part, by direct and/or transient protein interactions. Deciphering the tau interactome is critical for understanding the physiological and pathological roles of tau. This work aimed to identify potential tau interactors using the in situ protein labeling biotin identification (BioID2) method. Advantages of this approach include in-cell interactor labeling and an enhanced likelihood of detecting transient and/or weak interactions. We identified 324 potential tau interactors spanning multiple cellular compartments and pathways. We validated tau interactions with selected candidates using two independent approaches: proximity ligation assay and co-immunoprecipitation (co-IP) which included cytoskeletal proteins (MAP2 and MAP6), nucleus-associated proteins (FUS and prune1), and synaptic proteins (synapsin-1 and neurabin-2). Importantly, this approach revealed potential novel interactors that were not clearly identified by other interaction approaches such as co-IP. Thus, this approach is a powerful tool to identify potential members of the tau interactome via in situ labeling. This work helps expand our understanding of tau’s physiological roles, which may also advance our understanding of its role in neurodegenerative diseases.

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来源期刊
Journal of Proteome Research
Journal of Proteome Research 生物-生化研究方法
CiteScore
9.00
自引率
4.50%
发文量
251
审稿时长
3 months
期刊介绍: Journal of Proteome Research publishes content encompassing all aspects of global protein analysis and function, including the dynamic aspects of genomics, spatio-temporal proteomics, metabonomics and metabolomics, clinical and agricultural proteomics, as well as advances in methodology including bioinformatics. The theme and emphasis is on a multidisciplinary approach to the life sciences through the synergy between the different types of "omics".
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