{"title":"强johnsoniae黄杆菌中一个内切葡聚糖酶的鉴定和表征,这是糖苷水解酶家族中第一个内切酶。","authors":"Shuntaro Nakamura, Kazumi Funane, Takatsugu Miyazaki","doi":"10.1093/bbb/zbaf130","DOIUrl":null,"url":null,"abstract":"<p><p>Glycoside hydrolase family 27 (GH27) consists primarily of exo-acting enzymes, including α-galactosidase, α-N-acetylgalactosaminidase, β-L-arabinopyranosidase, and isomalto-dextranase. Here, we examined the gene expression profiles and biochemical characteristics of a multi-domain protein, Fjoh_4436 (named FjGH27A), which contains a GH27 catalytic domain and is encoded upstream of the previously described branched dextran utilization locus in Flavobacterium johnsoniae. Expression of this gene increased 7.7-fold when cultured with α-(1→2)- and α-(1→3)-branched dextran, produced by Leuconostoc citreum S-32, as the carbon source, compared with cultures using glucose or linear dextran. The catalytic domain of FjGH27A exhibited hydrolytic activity against linear dextran and produced isomaltooligosaccharides of various sizes in an endo-acting manner. The enzyme showed the highest activity toward linear dextran at pH 5.5-6.0 and 25°C-30°C. This represents the first identification of an endo-acting enzyme in the GH27 family, offering new insights into the mechanism of branched dextran degradation mediated by FjGH27A.</p>","PeriodicalId":9175,"journal":{"name":"Bioscience, Biotechnology, and Biochemistry","volume":" ","pages":""},"PeriodicalIF":1.3000,"publicationDate":"2025-09-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Identification and characterization of an endodextranase from Flavobacterium johnsoniae, the first endo-acting enzyme classified within glycoside hydrolase family 27.\",\"authors\":\"Shuntaro Nakamura, Kazumi Funane, Takatsugu Miyazaki\",\"doi\":\"10.1093/bbb/zbaf130\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Glycoside hydrolase family 27 (GH27) consists primarily of exo-acting enzymes, including α-galactosidase, α-N-acetylgalactosaminidase, β-L-arabinopyranosidase, and isomalto-dextranase. Here, we examined the gene expression profiles and biochemical characteristics of a multi-domain protein, Fjoh_4436 (named FjGH27A), which contains a GH27 catalytic domain and is encoded upstream of the previously described branched dextran utilization locus in Flavobacterium johnsoniae. Expression of this gene increased 7.7-fold when cultured with α-(1→2)- and α-(1→3)-branched dextran, produced by Leuconostoc citreum S-32, as the carbon source, compared with cultures using glucose or linear dextran. The catalytic domain of FjGH27A exhibited hydrolytic activity against linear dextran and produced isomaltooligosaccharides of various sizes in an endo-acting manner. The enzyme showed the highest activity toward linear dextran at pH 5.5-6.0 and 25°C-30°C. This represents the first identification of an endo-acting enzyme in the GH27 family, offering new insights into the mechanism of branched dextran degradation mediated by FjGH27A.</p>\",\"PeriodicalId\":9175,\"journal\":{\"name\":\"Bioscience, Biotechnology, and Biochemistry\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":1.3000,\"publicationDate\":\"2025-09-04\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Bioscience, Biotechnology, and Biochemistry\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://doi.org/10.1093/bbb/zbaf130\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Bioscience, Biotechnology, and Biochemistry","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.1093/bbb/zbaf130","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
引用次数: 0
摘要
糖苷水解酶家族27 (GH27)主要由外显作用酶组成,包括α-半乳糖苷酶、α- n -乙酰半乳糖苷酶、β- l -阿拉伯葡萄糖苷酶和异麦芽糖葡聚糖酶。本文研究了多结构域蛋白Fjoh_4436(命名为FjGH27A)的基因表达谱和生化特性,该蛋白含有GH27催化结构域,编码于johnsoniae黄杆菌中支链葡聚糖利用位点的上游。与使用葡萄糖或线性葡聚糖培养相比,用Leuconostoc citreum S-32生产的α-(1→2)-和α-(1→3)-支链葡聚糖作为碳源培养时,该基因的表达量增加了7.7倍。FjGH27A的催化结构域对线性葡聚糖具有水解活性,并以内作用的方式产生不同大小的低聚异麦芽糖。该酶在pH 5.5 ~ 6.0和25℃~ 30℃条件下对线性葡聚糖的活性最高。这是GH27家族中首次鉴定出一种内切酶,为FjGH27A介导的支链葡聚糖降解机制提供了新的见解。
Identification and characterization of an endodextranase from Flavobacterium johnsoniae, the first endo-acting enzyme classified within glycoside hydrolase family 27.
Glycoside hydrolase family 27 (GH27) consists primarily of exo-acting enzymes, including α-galactosidase, α-N-acetylgalactosaminidase, β-L-arabinopyranosidase, and isomalto-dextranase. Here, we examined the gene expression profiles and biochemical characteristics of a multi-domain protein, Fjoh_4436 (named FjGH27A), which contains a GH27 catalytic domain and is encoded upstream of the previously described branched dextran utilization locus in Flavobacterium johnsoniae. Expression of this gene increased 7.7-fold when cultured with α-(1→2)- and α-(1→3)-branched dextran, produced by Leuconostoc citreum S-32, as the carbon source, compared with cultures using glucose or linear dextran. The catalytic domain of FjGH27A exhibited hydrolytic activity against linear dextran and produced isomaltooligosaccharides of various sizes in an endo-acting manner. The enzyme showed the highest activity toward linear dextran at pH 5.5-6.0 and 25°C-30°C. This represents the first identification of an endo-acting enzyme in the GH27 family, offering new insights into the mechanism of branched dextran degradation mediated by FjGH27A.
期刊介绍:
Bioscience, Biotechnology, and Biochemistry publishes high-quality papers providing chemical and biological analyses of vital phenomena exhibited by animals, plants, and microorganisms, the chemical structures and functions of their products, and related matters. The Journal plays a major role in communicating to a global audience outstanding basic and applied research in all fields subsumed by the Japan Society for Bioscience, Biotechnology, and Agrochemistry (JSBBA).