{"title":"l -苏酸是一种抗坏血酸降解产物,其代谢需要一种具有l -苏酸代谢结构域的蛋白质。","authors":"Kojiro Yamamoto, Yukino Yamashita, Tamami Hamada, Atsuko Miyagi, Hideki Murayama, Akane Hamada, Takanori Maruta","doi":"10.1093/pcp/pcaf104","DOIUrl":null,"url":null,"abstract":"<p><p>L-Threonate is one of the major degradation products of ascorbate in plants. While bacteria can utilize L-threonate as a sole carbon source by converting it to dihydroxyacetone phosphate, a glycolysis intermediate, through a three- or four-step metabolic pathway, the corresponding processes in plants remain uncharacterized. Remarkably, an Arabidopsis gene encodes a unique protein containing domains homologous to all three enzymes involved in the bacterial three-step pathway. We designated this protein as L-threonate metabolizing domains (LTD) and investigated its functional role in plant L-threonate metabolism. Despite extensive efforts, recombinant expression of LTD was unsuccessful, likely due to its large protein size. Therefore, a reverse genetic approach was employed, using ltd knockout Arabidopsis lines to explore LTD function. Under continuous dark conditions, where ascorbate degradation is facilitated, LTD transcription was significantly upregulated, leading to increased L-threonate dehydrogenase activity. Knockout lines of LTD exhibited no detectable L-threonate dehydrogenase activity under both light and dark conditions, alongside elevated levels of L-threonate compared to wild-type plants. Although it remains to be determined whether LTD itself possesses all the enzymatic activities required for the bacterial three-step pathway, these results indicate that LTD is essential for L-threonate metabolism in Arabidopsis. The LTD gene is highly conserved among land plants but is absent in green algae, providing a hypothesis that the rise in ascorbate concentrations during plant evolution necessitated a more active metabolism of ascorbate degradation products.</p>","PeriodicalId":20575,"journal":{"name":"Plant and Cell Physiology","volume":" ","pages":""},"PeriodicalIF":4.0000,"publicationDate":"2025-09-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Metabolism of L-threonate, an ascorbate degradation product, requires a protein with L-threonate metabolizing domains in Arabidopsis.\",\"authors\":\"Kojiro Yamamoto, Yukino Yamashita, Tamami Hamada, Atsuko Miyagi, Hideki Murayama, Akane Hamada, Takanori Maruta\",\"doi\":\"10.1093/pcp/pcaf104\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>L-Threonate is one of the major degradation products of ascorbate in plants. While bacteria can utilize L-threonate as a sole carbon source by converting it to dihydroxyacetone phosphate, a glycolysis intermediate, through a three- or four-step metabolic pathway, the corresponding processes in plants remain uncharacterized. Remarkably, an Arabidopsis gene encodes a unique protein containing domains homologous to all three enzymes involved in the bacterial three-step pathway. We designated this protein as L-threonate metabolizing domains (LTD) and investigated its functional role in plant L-threonate metabolism. Despite extensive efforts, recombinant expression of LTD was unsuccessful, likely due to its large protein size. Therefore, a reverse genetic approach was employed, using ltd knockout Arabidopsis lines to explore LTD function. Under continuous dark conditions, where ascorbate degradation is facilitated, LTD transcription was significantly upregulated, leading to increased L-threonate dehydrogenase activity. Knockout lines of LTD exhibited no detectable L-threonate dehydrogenase activity under both light and dark conditions, alongside elevated levels of L-threonate compared to wild-type plants. Although it remains to be determined whether LTD itself possesses all the enzymatic activities required for the bacterial three-step pathway, these results indicate that LTD is essential for L-threonate metabolism in Arabidopsis. The LTD gene is highly conserved among land plants but is absent in green algae, providing a hypothesis that the rise in ascorbate concentrations during plant evolution necessitated a more active metabolism of ascorbate degradation products.</p>\",\"PeriodicalId\":20575,\"journal\":{\"name\":\"Plant and Cell Physiology\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":4.0000,\"publicationDate\":\"2025-09-02\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Plant and Cell Physiology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1093/pcp/pcaf104\",\"RegionNum\":2,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"CELL BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Plant and Cell Physiology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1093/pcp/pcaf104","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CELL BIOLOGY","Score":null,"Total":0}
引用次数: 0
摘要
l -苏酸盐是植物抗坏血酸的主要降解产物之一。虽然细菌可以利用l -苏酸盐作为唯一的碳源,通过三到四步的代谢途径将其转化为糖酵解中间体二羟丙酮磷酸,但在植物中相应的过程仍未被表征。值得注意的是,拟南芥基因编码一种独特的蛋白质,其中包含与细菌三步途径中涉及的所有三种酶同源的结构域。我们将该蛋白命名为l -苏酸代谢结构域(LTD),并研究了其在植物l -苏酸代谢中的功能作用。尽管进行了大量的努力,但LTD的重组表达没有成功,可能是由于其蛋白质大小较大。因此,采用反向遗传方法,利用ltd敲除拟南芥系来探索ltd功能。在持续的黑暗条件下,抗坏血酸降解被促进,LTD转录显著上调,导致l -苏酸脱氢酶活性增加。与野生型植物相比,敲除株在光照和黑暗条件下均未表现出可检测到的l -苏氨酸脱氢酶活性,同时l -苏氨酸水平升高。虽然尚不清楚LTD本身是否具有细菌三步通路所需的所有酶活性,但这些结果表明,LTD对拟南芥l -苏氨酸代谢至关重要。LTD基因在陆地植物中高度保守,但在绿藻中不存在,这提供了一种假设,即在植物进化过程中抗坏血酸浓度的上升需要抗坏血酸降解产物的更活跃的代谢。
Metabolism of L-threonate, an ascorbate degradation product, requires a protein with L-threonate metabolizing domains in Arabidopsis.
L-Threonate is one of the major degradation products of ascorbate in plants. While bacteria can utilize L-threonate as a sole carbon source by converting it to dihydroxyacetone phosphate, a glycolysis intermediate, through a three- or four-step metabolic pathway, the corresponding processes in plants remain uncharacterized. Remarkably, an Arabidopsis gene encodes a unique protein containing domains homologous to all three enzymes involved in the bacterial three-step pathway. We designated this protein as L-threonate metabolizing domains (LTD) and investigated its functional role in plant L-threonate metabolism. Despite extensive efforts, recombinant expression of LTD was unsuccessful, likely due to its large protein size. Therefore, a reverse genetic approach was employed, using ltd knockout Arabidopsis lines to explore LTD function. Under continuous dark conditions, where ascorbate degradation is facilitated, LTD transcription was significantly upregulated, leading to increased L-threonate dehydrogenase activity. Knockout lines of LTD exhibited no detectable L-threonate dehydrogenase activity under both light and dark conditions, alongside elevated levels of L-threonate compared to wild-type plants. Although it remains to be determined whether LTD itself possesses all the enzymatic activities required for the bacterial three-step pathway, these results indicate that LTD is essential for L-threonate metabolism in Arabidopsis. The LTD gene is highly conserved among land plants but is absent in green algae, providing a hypothesis that the rise in ascorbate concentrations during plant evolution necessitated a more active metabolism of ascorbate degradation products.
期刊介绍:
Plant & Cell Physiology (PCP) was established in 1959 and is the official journal of the Japanese Society of Plant Physiologists (JSPP). The title reflects the journal''s original interest and scope to encompass research not just at the whole-organism level but also at the cellular and subcellular levels.
Amongst the broad range of topics covered by this international journal, readers will find the very best original research on plant physiology, biochemistry, cell biology, molecular genetics, epigenetics, biotechnology, bioinformatics and –omics; as well as how plants respond to and interact with their environment (abiotic and biotic factors), and the biology of photosynthetic microorganisms.