锦葵科白杨叶绿体全基因组。

IF 0.7 4区 生物学 Q4 GENETICS & HEREDITY
Mitochondrial DNA. Part B, Resources Pub Date : 2025-08-19 eCollection Date: 2025-01-01 DOI:10.1080/23802359.2025.2548850
Yuanzhuo Wu
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引用次数: 0

摘要

近年来引进中国的冬青,具有独特的观赏价值。本研究的目的是利用Illumina HiSeq 6000平台上的高通量测序技术(NGS)获得wallichii的叶绿体全基因组序列,为其分类和进化研究提供支持。黄柳叶绿体基因组全长161278 bp,其结构组织由4个不同的部分组成:一个长89968 bp的大单拷贝(LSC)区、一个长20448 bp的小单拷贝(SSC)区和两个长25431 bp的反向重复(IR)区。碱基组成分析中,LSC区GC含量为34.3%,而SSC区和IR区GC含量分别为30.8%和43.1%。系统发育分析表明,瓦里奇草属植物与Corchoropsis属亲缘关系较近,具有共同的祖先。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
The complete chloroplast genome of Dombeya wallichii (Malvaceae).

Dombeya wallichii, which was recently introduced to China, possesses unique ornamental value. The aim of this study was to obtain the complete chloroplast genome sequence of D. wallichii using the high-throughput sequencing (NGS) on the Illumina HiSeq 6000 platform, thereby supporting its taxonomic and evolutionary research. The chloroplast genome in D. wallichii exhibited a total length of 161,278 bp, with the structural organization comprising four distinct components: a large single-copy (LSC) region spanning 89,968 bp, a small single-copy (SSC) segment measuring 20,448 bp, and two inverted repeat (IR) regions each extending 25,431 bp. Regarding base composition analysis, the LSC region displayed a GC content of 34.3%, while the SSC and IR regions showed respective values of 30.8% and 43.1%.The phylogenetic analysis showed that D. wallichii was closely related to the Corchoropsis species and shared a common ancestor.

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来源期刊
Mitochondrial DNA. Part B, Resources
Mitochondrial DNA. Part B, Resources Biochemistry, Genetics and Molecular Biology-Molecular Biology
CiteScore
1.30
自引率
20.00%
发文量
670
期刊介绍: This open access journal publishes high-quality and concise research articles reporting the sequence of full mitochondrial genomes, and short communications focusing on the physical, chemical, and biochemical aspects of mtDNA and proteins involved in mtDNA metabolism and interactions.
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