{"title":"锦葵科白杨叶绿体全基因组。","authors":"Yuanzhuo Wu","doi":"10.1080/23802359.2025.2548850","DOIUrl":null,"url":null,"abstract":"<p><p><i>Dombeya wallichii</i>, which was recently introduced to China, possesses unique ornamental value. The aim of this study was to obtain the complete chloroplast genome sequence of <i>D. wallichii</i> using the high-throughput sequencing (NGS) on the Illumina HiSeq 6000 platform, thereby supporting its taxonomic and evolutionary research. The chloroplast genome in <i>D. wallichii</i> exhibited a total length of 161,278 bp, with the structural organization comprising four distinct components: a large single-copy (LSC) region spanning 89,968 bp, a small single-copy (SSC) segment measuring 20,448 bp, and two inverted repeat (IR) regions each extending 25,431 bp. Regarding base composition analysis, the LSC region displayed a GC content of 34.3%, while the SSC and IR regions showed respective values of 30.8% and 43.1%.The phylogenetic analysis showed that <i>D. wallichii</i> was closely related to the <i>Corchoropsis</i> species and shared a common ancestor.</p>","PeriodicalId":18647,"journal":{"name":"Mitochondrial DNA. Part B, Resources","volume":"10 9","pages":"842-846"},"PeriodicalIF":0.7000,"publicationDate":"2025-08-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12372520/pdf/","citationCount":"0","resultStr":"{\"title\":\"The complete chloroplast genome of <i>Dombeya wallichii</i> (Malvaceae).\",\"authors\":\"Yuanzhuo Wu\",\"doi\":\"10.1080/23802359.2025.2548850\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p><i>Dombeya wallichii</i>, which was recently introduced to China, possesses unique ornamental value. The aim of this study was to obtain the complete chloroplast genome sequence of <i>D. wallichii</i> using the high-throughput sequencing (NGS) on the Illumina HiSeq 6000 platform, thereby supporting its taxonomic and evolutionary research. The chloroplast genome in <i>D. wallichii</i> exhibited a total length of 161,278 bp, with the structural organization comprising four distinct components: a large single-copy (LSC) region spanning 89,968 bp, a small single-copy (SSC) segment measuring 20,448 bp, and two inverted repeat (IR) regions each extending 25,431 bp. Regarding base composition analysis, the LSC region displayed a GC content of 34.3%, while the SSC and IR regions showed respective values of 30.8% and 43.1%.The phylogenetic analysis showed that <i>D. wallichii</i> was closely related to the <i>Corchoropsis</i> species and shared a common ancestor.</p>\",\"PeriodicalId\":18647,\"journal\":{\"name\":\"Mitochondrial DNA. Part B, Resources\",\"volume\":\"10 9\",\"pages\":\"842-846\"},\"PeriodicalIF\":0.7000,\"publicationDate\":\"2025-08-19\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12372520/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Mitochondrial DNA. Part B, Resources\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1080/23802359.2025.2548850\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2025/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"Q4\",\"JCRName\":\"GENETICS & HEREDITY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Mitochondrial DNA. Part B, Resources","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1080/23802359.2025.2548850","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/1/1 0:00:00","PubModel":"eCollection","JCR":"Q4","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
The complete chloroplast genome of Dombeya wallichii (Malvaceae).
Dombeya wallichii, which was recently introduced to China, possesses unique ornamental value. The aim of this study was to obtain the complete chloroplast genome sequence of D. wallichii using the high-throughput sequencing (NGS) on the Illumina HiSeq 6000 platform, thereby supporting its taxonomic and evolutionary research. The chloroplast genome in D. wallichii exhibited a total length of 161,278 bp, with the structural organization comprising four distinct components: a large single-copy (LSC) region spanning 89,968 bp, a small single-copy (SSC) segment measuring 20,448 bp, and two inverted repeat (IR) regions each extending 25,431 bp. Regarding base composition analysis, the LSC region displayed a GC content of 34.3%, while the SSC and IR regions showed respective values of 30.8% and 43.1%.The phylogenetic analysis showed that D. wallichii was closely related to the Corchoropsis species and shared a common ancestor.
期刊介绍:
This open access journal publishes high-quality and concise research articles reporting the sequence of full mitochondrial genomes, and short communications focusing on the physical, chemical, and biochemical aspects of mtDNA and proteins involved in mtDNA metabolism and interactions.