利用代谢组学和基因组学方法从一种海洋来源的小单孢子菌中发现新的依维菌素类似物。

IF 5.4 2区 医学 Q1 CHEMISTRY, MEDICINAL
Marine Drugs Pub Date : 2025-07-31 DOI:10.3390/md23080316
Tae Hyun Lee, Nathan J Brittin, Imraan Alas, Christopher D Roberts, Shaurya Chanana, Doug R Braun, Spencer S Ericksen, Song Guo, Scott R Rajski, Tim S Bugni
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引用次数: 0

摘要

在基因组挖掘计划的过程中,我们发现了一种海洋来源的小单孢子菌,这里命名为菌株WMMD956;WMMD956的基因组似乎包含了许多与伊维菌素相关的特征,伊维菌素是众所周知的抗菌正霉素。此外,基于lcms的层次聚类分析和主成分分析(hcapca)显示,WMMD956具有极高的代谢组学和基因组新颖性。利用高分辨率串联质谱(HRMS/MS)和全球天然产物社会分子网络平台(GNPS)对WMMD956进行重复分析,鉴定出了先前已知的everninomicin的几种类似物。化学结构通过HR-ESI-MS、1D和2D NMR实验以及MS/MS数据得到了明确的证实。分离的代谢物1-3对耐甲氧西林金黄色葡萄球菌(MRSA)的抗菌活性进行了评估。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Discovery of New Everninomicin Analogs from a Marine-Derived Micromonospora sp. by Metabolomics and Genomics Approaches.

During the course of genome mining initiatives, we identified a marine-derived Micromonospora, assigned here as strain WMMD956; the genome of WMMD956 appeared to contain a number of features associated with everninomicins, well-known antimicrobial orthosomycins. In addition, LCMS-based hierarchical clustering analysis and principal component analysis (hcapca) revealed that WMMD956 displayed an extreme degree of metabolomic and genomic novelty. Dereplication of high-resolution tandem mass spectrometry (HRMS/MS) and Global Natural Product Social molecular networking platform (GNPS) analysis of WMMD956 resulted in the identification of several analogs of the previously known everninomicin. Chemical structures were unambiguously confirmed by HR-ESI-MS, 1D and 2D NMR experiments, and the use of MS/MS data. The isolated metabolites, 1-3, were evaluated for their antibacterial activity against methicillin-resistant Staphylococcus aureus (MRSA).

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来源期刊
Marine Drugs
Marine Drugs 医学-医药化学
CiteScore
9.60
自引率
14.80%
发文量
671
审稿时长
1 months
期刊介绍: Marine Drugs (ISSN 1660-3397) publishes reviews, regular research papers and short notes on the research, development and production of drugs from the sea. Our aim is to encourage scientists to publish their experimental and theoretical research in as much detail as possible, particularly synthetic procedures and characterization information for bioactive compounds. There is no restriction on the length of the experimental section.
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