Xian-Jie Zhen, Tao Wu, Min Zhang, Chu-Yue Zhang, Rui-Jie Liu, Jing Jiang, Guang-Jian Jiang
{"title":"疲劳型2型糖尿病circrna介导的ceRNA分子调控网络","authors":"Xian-Jie Zhen, Tao Wu, Min Zhang, Chu-Yue Zhang, Rui-Jie Liu, Jing Jiang, Guang-Jian Jiang","doi":"10.1186/s12967-025-07007-y","DOIUrl":null,"url":null,"abstract":"<p><p>Fatigue is a common but poorly understood issue in type 2 diabetes (T2DM) that affects quality of life. Although ceRNA networks regulate disease progression, their role in T2DM-related fatigue (F-T2DM) is unclear. This study developed a circRNA-mediated ceRNA network to uncover the molecular interactions causing fatigue in F-T2DM. The study included healthy control group (Control, n = 21), F-T2DM group (n = 21), and non-fatigue type 2 diabetes patients (NF-T2DM, n = 21). By combining high-throughput sequencing to screen differentially expressed circRNAs (F-T2DM vs Control: 1144; F-T2DM vs NF-T2DM: 1303) and mRNAs (F-T2DM vs Control: 912; F-T2DM vs NF-T2DM: 1190), it was found that hsa_circ_0078539 and hsa_circ_0026239 were significantly upregulated in F-T2DM compared to both Control and NF-T2DM groups, and their host genes were involved in cytoskeleton remodeling. The GO/KEGG enrichment analysis combined with weighted gene co-expression network (WGCNA) of F-T2DM compared with Control indicated that the core pathways of F-T2DM focused on actin cytoskeleton dynamic regulation, AMPK signaling pathway, tricarboxylic acid cycle, and oxidative stress response. In the enrichment analysis of F-T2DM and NF-T2DM, cytoskeleton dynamics regulation, AMPK signaling pathway, and tricarboxylic acid cycle were further enriched, and the specific activation of reactive oxygen metabolism balance and AGE-RAGE pathway was also observed. Further, through multi-database prediction and experimental verification, a F-T2DM-specific ceRNA network was constructed, and key regulatory axes hsa_circ_0044623/hsa-mir-129-5p/MYLK3, hsa_circ_0002622/hsa-mir-200b-3p/RAB21, and hsa_circ_0078539/hsa-mir-4695-3p/SLC7A14 were screened out. The ceRNA regulatory network in human and animal samples was confirmed using RT-qPCR. These axes drive the pathological process by regulating myocardial contractility efficiency, glucose transport, mitochondrial energy metabolism, and insulin signaling pathway. This study clarified the molecular regulatory mode of patients with fatigue type 2 diabetes from the perspective of ceRNA network, providing a new direction for the research on diabetes classification and diagnosis.</p>","PeriodicalId":17458,"journal":{"name":"Journal of Translational Medicine","volume":"23 1","pages":"973"},"PeriodicalIF":7.5000,"publicationDate":"2025-09-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12403349/pdf/","citationCount":"0","resultStr":"{\"title\":\"The circRNA-mediated ceRNA molecular regulatory network in fatigue-type type 2 diabete.\",\"authors\":\"Xian-Jie Zhen, Tao Wu, Min Zhang, Chu-Yue Zhang, Rui-Jie Liu, Jing Jiang, Guang-Jian Jiang\",\"doi\":\"10.1186/s12967-025-07007-y\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Fatigue is a common but poorly understood issue in type 2 diabetes (T2DM) that affects quality of life. Although ceRNA networks regulate disease progression, their role in T2DM-related fatigue (F-T2DM) is unclear. This study developed a circRNA-mediated ceRNA network to uncover the molecular interactions causing fatigue in F-T2DM. The study included healthy control group (Control, n = 21), F-T2DM group (n = 21), and non-fatigue type 2 diabetes patients (NF-T2DM, n = 21). By combining high-throughput sequencing to screen differentially expressed circRNAs (F-T2DM vs Control: 1144; F-T2DM vs NF-T2DM: 1303) and mRNAs (F-T2DM vs Control: 912; F-T2DM vs NF-T2DM: 1190), it was found that hsa_circ_0078539 and hsa_circ_0026239 were significantly upregulated in F-T2DM compared to both Control and NF-T2DM groups, and their host genes were involved in cytoskeleton remodeling. The GO/KEGG enrichment analysis combined with weighted gene co-expression network (WGCNA) of F-T2DM compared with Control indicated that the core pathways of F-T2DM focused on actin cytoskeleton dynamic regulation, AMPK signaling pathway, tricarboxylic acid cycle, and oxidative stress response. In the enrichment analysis of F-T2DM and NF-T2DM, cytoskeleton dynamics regulation, AMPK signaling pathway, and tricarboxylic acid cycle were further enriched, and the specific activation of reactive oxygen metabolism balance and AGE-RAGE pathway was also observed. Further, through multi-database prediction and experimental verification, a F-T2DM-specific ceRNA network was constructed, and key regulatory axes hsa_circ_0044623/hsa-mir-129-5p/MYLK3, hsa_circ_0002622/hsa-mir-200b-3p/RAB21, and hsa_circ_0078539/hsa-mir-4695-3p/SLC7A14 were screened out. The ceRNA regulatory network in human and animal samples was confirmed using RT-qPCR. 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引用次数: 0
摘要
疲劳是影响生活质量的2型糖尿病(T2DM)中一种常见但鲜为人知的问题。尽管ceRNA网络调节疾病进展,但其在t2dm相关疲劳(F-T2DM)中的作用尚不清楚。本研究建立了环状rna介导的ceRNA网络,以揭示导致F-T2DM患者疲劳的分子相互作用。研究包括健康对照组(control, n = 21)、F-T2DM组(n = 21)和非疲劳型2型糖尿病患者(NF-T2DM, n = 21)。通过结合高通量测序筛选差异表达的circrna (F-T2DM vs对照组:1144;F-T2DM vs NF-T2DM: 1303)和mrna (F-T2DM vs对照组:912;F-T2DM vs NF-T2DM: 1190),发现与对照组和NF-T2DM组相比,hsa_circ_0078539和hsa_circ_0026239在F-T2DM中均显著上调,其宿主基因参与细胞骨架重塑。与对照组比较,F-T2DM的GO/KEGG富集分析结合加权基因共表达网络(weighted gene co-expression network, WGCNA)表明,F-T2DM的核心通路集中在肌动蛋白细胞骨架动态调节、AMPK信号通路、三羧酸循环和氧化应激反应。在F-T2DM和NF-T2DM的富集分析中,进一步富集了细胞骨架动力学调节、AMPK信号通路、三羧酸循环,并观察了活性氧代谢平衡和AGE-RAGE通路的特异性激活。进一步,通过多数据库预测和实验验证,构建f - t2dm特异性ceRNA网络,筛选出关键调控轴hsa_circ_0044623/hsa-mir-129-5p/MYLK3、hsa_circ_0002622/hsa-mir-200b-3p/RAB21和hsa_circ_0078539/hsa-mir-4695-3p/SLC7A14。RT-qPCR证实了人类和动物样本中的ceRNA调控网络。这些轴通过调节心肌收缩效率、葡萄糖转运、线粒体能量代谢和胰岛素信号通路来驱动病理过程。本研究从ceRNA网络的角度阐明了疲劳型2型糖尿病患者的分子调控模式,为糖尿病的分类和诊断研究提供了新的方向。
The circRNA-mediated ceRNA molecular regulatory network in fatigue-type type 2 diabete.
Fatigue is a common but poorly understood issue in type 2 diabetes (T2DM) that affects quality of life. Although ceRNA networks regulate disease progression, their role in T2DM-related fatigue (F-T2DM) is unclear. This study developed a circRNA-mediated ceRNA network to uncover the molecular interactions causing fatigue in F-T2DM. The study included healthy control group (Control, n = 21), F-T2DM group (n = 21), and non-fatigue type 2 diabetes patients (NF-T2DM, n = 21). By combining high-throughput sequencing to screen differentially expressed circRNAs (F-T2DM vs Control: 1144; F-T2DM vs NF-T2DM: 1303) and mRNAs (F-T2DM vs Control: 912; F-T2DM vs NF-T2DM: 1190), it was found that hsa_circ_0078539 and hsa_circ_0026239 were significantly upregulated in F-T2DM compared to both Control and NF-T2DM groups, and their host genes were involved in cytoskeleton remodeling. The GO/KEGG enrichment analysis combined with weighted gene co-expression network (WGCNA) of F-T2DM compared with Control indicated that the core pathways of F-T2DM focused on actin cytoskeleton dynamic regulation, AMPK signaling pathway, tricarboxylic acid cycle, and oxidative stress response. In the enrichment analysis of F-T2DM and NF-T2DM, cytoskeleton dynamics regulation, AMPK signaling pathway, and tricarboxylic acid cycle were further enriched, and the specific activation of reactive oxygen metabolism balance and AGE-RAGE pathway was also observed. Further, through multi-database prediction and experimental verification, a F-T2DM-specific ceRNA network was constructed, and key regulatory axes hsa_circ_0044623/hsa-mir-129-5p/MYLK3, hsa_circ_0002622/hsa-mir-200b-3p/RAB21, and hsa_circ_0078539/hsa-mir-4695-3p/SLC7A14 were screened out. The ceRNA regulatory network in human and animal samples was confirmed using RT-qPCR. These axes drive the pathological process by regulating myocardial contractility efficiency, glucose transport, mitochondrial energy metabolism, and insulin signaling pathway. This study clarified the molecular regulatory mode of patients with fatigue type 2 diabetes from the perspective of ceRNA network, providing a new direction for the research on diabetes classification and diagnosis.
期刊介绍:
The Journal of Translational Medicine is an open-access journal that publishes articles focusing on information derived from human experimentation to enhance communication between basic and clinical science. It covers all areas of translational medicine.