耐冷芽孢杆菌Ming等,2012年作为嗜藻芽孢杆菌后异型同系物重新分类(Nakamura 1987); Shida等,1997。

IF 2 3区 生物学 Q4 MICROBIOLOGY
Baiyuan Li, Ziqi Liang, Dan Chen, Weiwei Mao, Renxia Zhang, Zixun Hu, Jian Gao
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引用次数: 0

摘要

本研究利用多相分类学方法对耐冷芽孢杆菌和溶藻芽孢杆菌的分类关系进行了重新评估。16S rRNA基因序列分析表明,溶藻假单胞菌DSM 5050T与植物芽孢杆菌LMG 31458T(99.57%)、发芽芽孢杆菌LMG 31460T(99.28%)、耐冷假单胞杆菌YIM 016T(99.07%)和植物芽孢杆菌LMG 31457T(98.49%)序列相似性最高。基于16S rRNA基因序列和全基因组序列的系统发育分析显示,溶藻假单胞菌DSM 5050T与耐冷假单胞菌YIM 016T聚类,两者亲缘关系密切。此外,它们之间的平均核苷酸一致性(ANI)和数字DNA-DNA杂交(dDDH)值分别为97.33和76.90%,超过了ANI的95-96%和dDDH的70%的推荐种划分阈值。这些结果表明,溶藻假单胞菌和抗冷假单胞菌属于同一基因组种。表型和化学分类特征进一步支持了这一结论。根据上述数据,我们认为P. frigoriresistens Ming et al. 2012是P. alginolyticus (Nakamura 1987)和Shida et al. 1997)的后异型同义词。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Reclassification of Paenibacillus frigoriresistens Ming et al. 2012 as a later heterotypic synonym of Paenibacillus alginolyticus (Nakamura 1987) Shida et al. 1997.

In this study, the taxonomic relationship between Paenibacillus frigoriresistens and Paenibacillus alginolyticus was reassessed utilizing a polyphasic taxonomic approach. Molecular identification through 16S rRNA gene sequence analysis demonstrated that P. alginolyticus DSM 5050T exhibited the highest sequence similarities with Paenibacillus phytorum LMG 31458T (99.57%), Paenibacillus germinis LMG 31460T (99.28%), P. frigoriresistens YIM 016T (99.07%) and Paenibacillus planticolens LMG 31457T (98.49%). Phylogenetic analyses based on both 16S rRNA gene sequences and whole-genome sequences revealed that P. alginolyticus DSM 5050T clustered with P. frigoriresistens YIM 016T, suggesting a close relationship between these two strains. Moreover, the average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) values between them were 97.33 and 76.90%, respectively, surpassing the recommended species delineation thresholds of 95-96% for ANI and 70% for dDDH. These results indicated that P. alginolyticus and P. frigoriresistens belonged to the same genomic species. This conclusion was further supported by phenotypic and chemotaxonomic characteristics. According to the data above, we propose that P. frigoriresistens Ming et al. 2012 is a later heterotypic synonym of P. alginolyticus (Nakamura 1987) Shida et al. 1997.

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来源期刊
CiteScore
5.20
自引率
21.40%
发文量
426
审稿时长
1 months
期刊介绍: Published by the Microbiology Society and owned by the International Committee on Systematics of Prokaryotes (ICSP), a committee of the Bacteriology and Applied Microbiology Division of the International Union of Microbiological Societies, International Journal of Systematic and Evolutionary Microbiology is the leading forum for the publication of novel microbial taxa and the ICSP’s official journal of record for prokaryotic names. The journal welcomes high-quality research on all aspects of microbial evolution, phylogenetics and systematics, encouraging submissions on all prokaryotes, yeasts, microfungi, protozoa and microalgae across the full breadth of systematics including: Identification, characterisation and culture preservation Microbial evolution and biodiversity Molecular environmental work with strong taxonomic or evolutionary content Nomenclature Taxonomy and phylogenetics.
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