Peter Bing Svendsen, Mille Rask Sander, Cecille Jasmin Elizabeth Hobbs, Philip Staffeldt, Jette Melchiorsen, Sarah Kirstein, Yuyan Liu, Paul Kempen, Mikkel Bentzon-Tilia, Lone Gram, Line Roager
{"title":"从克里特岛海岸和丹麦罗斯基勒峡湾的海水中分离出克里特岛11号辉杆菌和苔藓藻11号辉杆菌。","authors":"Peter Bing Svendsen, Mille Rask Sander, Cecille Jasmin Elizabeth Hobbs, Philip Staffeldt, Jette Melchiorsen, Sarah Kirstein, Yuyan Liu, Paul Kempen, Mikkel Bentzon-Tilia, Lone Gram, Line Roager","doi":"10.1099/ijsem.0.006902","DOIUrl":null,"url":null,"abstract":"<p><p>Two Gram-negative, motile, rod-shaped bacteria, designated as C3_T13_0<sup>T</sup> and A36a-5a<sup>T</sup>, were isolated from marine environments collected off the coast of Crete, Greece, and from a biofilm in Jyllinge Harbor in Roskilde Fjord, Denmark, respectively. 16S rRNA gene phylogeny revealed that the two strains belong to the genus <i>Phaeobacter</i>. The major cellular fatty acids (>5%) were C<sub>18 : 1</sub> <i> ω</i>7<i>c</i> for strain A36a-5a<sup>T</sup> and C<sub>18 : 1</sub> <i> ω</i>7<i>c</i>, C<sub>18 : 2</sub> <i> ω</i>7,13 and C<sub>16 : 0</sub> for strain C3_T13_0<sup>T</sup>. The major respiratory quinone was ubiquinone-10, and the predominant polar lipids were phosphatidylcholine, phosphatidylglycerol, and phosphatidylethanolamine for both strains. C3_T13_0<sup>T</sup> and A36a-5a<sup>T</sup> both produce the antimicrobial compound tropodithietic acid. The C3_T13_0<sup>T</sup> strain grows at temperatures between 8 and 37 °C with an optimum of 25 °C, whereas A36a-5a<sup>T</sup> grows between 5 and 37 °C with an optimum of 30 °C. The salinity range for growth was 2-9 % NaCl (w/v) for C3_T13_0<sup>T</sup> with an optimum of 3-4% and 0-10% NaCl (w/v) for A36a-5a<sup>T</sup> with an optimum of 2-6%. The genomes of the two strains shared an average nucleotide identity (ANI) of 84% and had lower than 87% ANI when compared with genomes of <i>Phaeobacter</i> spp. type strains. The genome of C3_T13_0<sup>T</sup> was 4,432,895 bp with a G+C content of 55.96 mol%, and the genome of A36a-5a<sup>T</sup> was 4,050,005 bp with a G+C content of 61.37 mol%. Based on the phylogenetic and phenotypic analyses presented here, the two isolates C3_T13_0<sup>T</sup> (=DSM 118664<sup>T</sup>=LMG 33738<sup>T</sup>) and A36a-5a<sup>T</sup> (=DSM 118663<sup>T</sup>=LMG 33737<sup>T</sup>) are considered to represent two novel species belonging to the genus <i>Phaeobacter</i>, for which the names <i>Phaeobacter cretensis</i> sp. nov. and <i>Phaeobacter bryozoorum</i> sp. nov. are proposed, respectively.</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":"75 8","pages":""},"PeriodicalIF":2.0000,"publicationDate":"2025-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"<i>Phaeobacter cretensis</i> sp. nov. and <i>Phaeobacter bryozoorum</i> sp. nov., isolated from seawater from off the coast of Crete and from Roskilde Fjord in Denmark.\",\"authors\":\"Peter Bing Svendsen, Mille Rask Sander, Cecille Jasmin Elizabeth Hobbs, Philip Staffeldt, Jette Melchiorsen, Sarah Kirstein, Yuyan Liu, Paul Kempen, Mikkel Bentzon-Tilia, Lone Gram, Line Roager\",\"doi\":\"10.1099/ijsem.0.006902\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Two Gram-negative, motile, rod-shaped bacteria, designated as C3_T13_0<sup>T</sup> and A36a-5a<sup>T</sup>, were isolated from marine environments collected off the coast of Crete, Greece, and from a biofilm in Jyllinge Harbor in Roskilde Fjord, Denmark, respectively. 16S rRNA gene phylogeny revealed that the two strains belong to the genus <i>Phaeobacter</i>. The major cellular fatty acids (>5%) were C<sub>18 : 1</sub> <i> ω</i>7<i>c</i> for strain A36a-5a<sup>T</sup> and C<sub>18 : 1</sub> <i> ω</i>7<i>c</i>, C<sub>18 : 2</sub> <i> ω</i>7,13 and C<sub>16 : 0</sub> for strain C3_T13_0<sup>T</sup>. The major respiratory quinone was ubiquinone-10, and the predominant polar lipids were phosphatidylcholine, phosphatidylglycerol, and phosphatidylethanolamine for both strains. C3_T13_0<sup>T</sup> and A36a-5a<sup>T</sup> both produce the antimicrobial compound tropodithietic acid. The C3_T13_0<sup>T</sup> strain grows at temperatures between 8 and 37 °C with an optimum of 25 °C, whereas A36a-5a<sup>T</sup> grows between 5 and 37 °C with an optimum of 30 °C. The salinity range for growth was 2-9 % NaCl (w/v) for C3_T13_0<sup>T</sup> with an optimum of 3-4% and 0-10% NaCl (w/v) for A36a-5a<sup>T</sup> with an optimum of 2-6%. The genomes of the two strains shared an average nucleotide identity (ANI) of 84% and had lower than 87% ANI when compared with genomes of <i>Phaeobacter</i> spp. type strains. The genome of C3_T13_0<sup>T</sup> was 4,432,895 bp with a G+C content of 55.96 mol%, and the genome of A36a-5a<sup>T</sup> was 4,050,005 bp with a G+C content of 61.37 mol%. Based on the phylogenetic and phenotypic analyses presented here, the two isolates C3_T13_0<sup>T</sup> (=DSM 118664<sup>T</sup>=LMG 33738<sup>T</sup>) and A36a-5a<sup>T</sup> (=DSM 118663<sup>T</sup>=LMG 33737<sup>T</sup>) are considered to represent two novel species belonging to the genus <i>Phaeobacter</i>, for which the names <i>Phaeobacter cretensis</i> sp. nov. and <i>Phaeobacter bryozoorum</i> sp. nov. are proposed, respectively.</p>\",\"PeriodicalId\":14390,\"journal\":{\"name\":\"International journal of systematic and evolutionary microbiology\",\"volume\":\"75 8\",\"pages\":\"\"},\"PeriodicalIF\":2.0000,\"publicationDate\":\"2025-08-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"International journal of systematic and evolutionary microbiology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1099/ijsem.0.006902\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"International journal of systematic and evolutionary microbiology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1099/ijsem.0.006902","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
Phaeobacter cretensis sp. nov. and Phaeobacter bryozoorum sp. nov., isolated from seawater from off the coast of Crete and from Roskilde Fjord in Denmark.
Two Gram-negative, motile, rod-shaped bacteria, designated as C3_T13_0T and A36a-5aT, were isolated from marine environments collected off the coast of Crete, Greece, and from a biofilm in Jyllinge Harbor in Roskilde Fjord, Denmark, respectively. 16S rRNA gene phylogeny revealed that the two strains belong to the genus Phaeobacter. The major cellular fatty acids (>5%) were C18 : 1 ω7c for strain A36a-5aT and C18 : 1 ω7c, C18 : 2 ω7,13 and C16 : 0 for strain C3_T13_0T. The major respiratory quinone was ubiquinone-10, and the predominant polar lipids were phosphatidylcholine, phosphatidylglycerol, and phosphatidylethanolamine for both strains. C3_T13_0T and A36a-5aT both produce the antimicrobial compound tropodithietic acid. The C3_T13_0T strain grows at temperatures between 8 and 37 °C with an optimum of 25 °C, whereas A36a-5aT grows between 5 and 37 °C with an optimum of 30 °C. The salinity range for growth was 2-9 % NaCl (w/v) for C3_T13_0T with an optimum of 3-4% and 0-10% NaCl (w/v) for A36a-5aT with an optimum of 2-6%. The genomes of the two strains shared an average nucleotide identity (ANI) of 84% and had lower than 87% ANI when compared with genomes of Phaeobacter spp. type strains. The genome of C3_T13_0T was 4,432,895 bp with a G+C content of 55.96 mol%, and the genome of A36a-5aT was 4,050,005 bp with a G+C content of 61.37 mol%. Based on the phylogenetic and phenotypic analyses presented here, the two isolates C3_T13_0T (=DSM 118664T=LMG 33738T) and A36a-5aT (=DSM 118663T=LMG 33737T) are considered to represent two novel species belonging to the genus Phaeobacter, for which the names Phaeobacter cretensis sp. nov. and Phaeobacter bryozoorum sp. nov. are proposed, respectively.
期刊介绍:
Published by the Microbiology Society and owned by the International Committee on Systematics of Prokaryotes (ICSP), a committee of the Bacteriology and Applied Microbiology Division of the International Union of Microbiological Societies, International Journal of Systematic and Evolutionary Microbiology is the leading forum for the publication of novel microbial taxa and the ICSP’s official journal of record for prokaryotic names.
The journal welcomes high-quality research on all aspects of microbial evolution, phylogenetics and systematics, encouraging submissions on all prokaryotes, yeasts, microfungi, protozoa and microalgae across the full breadth of systematics including:
Identification, characterisation and culture preservation
Microbial evolution and biodiversity
Molecular environmental work with strong taxonomic or evolutionary content
Nomenclature
Taxonomy and phylogenetics.