从克里特岛海岸和丹麦罗斯基勒峡湾的海水中分离出克里特岛11号辉杆菌和苔藓藻11号辉杆菌。

IF 2 3区 生物学 Q4 MICROBIOLOGY
Peter Bing Svendsen, Mille Rask Sander, Cecille Jasmin Elizabeth Hobbs, Philip Staffeldt, Jette Melchiorsen, Sarah Kirstein, Yuyan Liu, Paul Kempen, Mikkel Bentzon-Tilia, Lone Gram, Line Roager
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引用次数: 0

摘要

分别从希腊克里特岛海岸和丹麦罗斯基勒峡湾Jyllinge港的生物膜中分离出两种革兰氏阴性、可运动的杆状细菌,命名为C3_T13_0T和A36a-5aT。16S rRNA基因系统发育表明,这两株菌株属于Phaeobacter属。菌株A36a-5aT的主要细胞脂肪酸为C18: 1 ω7c,菌株C3_T13_0T的主要细胞脂肪酸为C18: 1 ω7c、C18: 2 ω7,13和C16: 0。两菌株的主要呼吸醌为泛醌-10,主要极性脂质为磷脂酰胆碱、磷脂酰甘油和磷脂酰乙醇胺。C3_T13_0T和A36a-5aT都产生抗菌化合物tropodithi酸。C3_T13_0T菌株生长温度为8 ~ 37℃,最适温度为25℃,而A36a-5aT菌株生长温度为5 ~ 37℃,最适温度为30℃。C3_T13_0T生长的盐度范围为2 ~ 9% NaCl (w/v),最适盐度为3 ~ 4%;A36a-5aT生长的盐度范围为0 ~ 10% NaCl (w/v),最适盐度为2 ~ 6%。两菌株基因组的平均核苷酸同一性(ANI)为84%,与Phaeobacter spp. type菌株的基因组相比ANI低于87%。C3_T13_0T基因组为4,432,895 bp, G+C含量为55.96 mol%; A36a-5aT基因组为4,050,000,005 bp, G+C含量为61.37 mol%。基于系统发育和表型分析,认为C3_T13_0T (=DSM 118664T=LMG 33738T)和A36a-5aT (=DSM 118663T=LMG 33737T)是辉杆菌属的两个新种,分别命名为cretensis Phaeobacter sp. 11和bryozoorum Phaeobacter sp. 11。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Phaeobacter cretensis sp. nov. and Phaeobacter bryozoorum sp. nov., isolated from seawater from off the coast of Crete and from Roskilde Fjord in Denmark.

Two Gram-negative, motile, rod-shaped bacteria, designated as C3_T13_0T and A36a-5aT, were isolated from marine environments collected off the coast of Crete, Greece, and from a biofilm in Jyllinge Harbor in Roskilde Fjord, Denmark, respectively. 16S rRNA gene phylogeny revealed that the two strains belong to the genus Phaeobacter. The major cellular fatty acids (>5%) were C18 : 1  ω7c for strain A36a-5aT and C18 : 1  ω7c, C18 : 2  ω7,13 and C16 : 0 for strain C3_T13_0T. The major respiratory quinone was ubiquinone-10, and the predominant polar lipids were phosphatidylcholine, phosphatidylglycerol, and phosphatidylethanolamine for both strains. C3_T13_0T and A36a-5aT both produce the antimicrobial compound tropodithietic acid. The C3_T13_0T strain grows at temperatures between 8 and 37 °C with an optimum of 25 °C, whereas A36a-5aT grows between 5 and 37 °C with an optimum of 30 °C. The salinity range for growth was 2-9 % NaCl (w/v) for C3_T13_0T with an optimum of 3-4% and 0-10% NaCl (w/v) for A36a-5aT with an optimum of 2-6%. The genomes of the two strains shared an average nucleotide identity (ANI) of 84% and had lower than 87% ANI when compared with genomes of Phaeobacter spp. type strains. The genome of C3_T13_0T was 4,432,895 bp with a G+C content of 55.96 mol%, and the genome of A36a-5aT was 4,050,005 bp with a G+C content of 61.37 mol%. Based on the phylogenetic and phenotypic analyses presented here, the two isolates C3_T13_0T (=DSM 118664T=LMG 33738T) and A36a-5aT (=DSM 118663T=LMG 33737T) are considered to represent two novel species belonging to the genus Phaeobacter, for which the names Phaeobacter cretensis sp. nov. and Phaeobacter bryozoorum sp. nov. are proposed, respectively.

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来源期刊
CiteScore
5.20
自引率
21.40%
发文量
426
审稿时长
1 months
期刊介绍: Published by the Microbiology Society and owned by the International Committee on Systematics of Prokaryotes (ICSP), a committee of the Bacteriology and Applied Microbiology Division of the International Union of Microbiological Societies, International Journal of Systematic and Evolutionary Microbiology is the leading forum for the publication of novel microbial taxa and the ICSP’s official journal of record for prokaryotic names. The journal welcomes high-quality research on all aspects of microbial evolution, phylogenetics and systematics, encouraging submissions on all prokaryotes, yeasts, microfungi, protozoa and microalgae across the full breadth of systematics including: Identification, characterisation and culture preservation Microbial evolution and biodiversity Molecular environmental work with strong taxonomic or evolutionary content Nomenclature Taxonomy and phylogenetics.
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