Gerald M Aguilar, Kristel Mae P Oliveros, Albert Remus R Rosana, Rina B Opulencia, Asuncion K Raymundo
{"title":"从菲律宾马荣火山土壤中分离的马荣链霉菌。","authors":"Gerald M Aguilar, Kristel Mae P Oliveros, Albert Remus R Rosana, Rina B Opulencia, Asuncion K Raymundo","doi":"10.1099/ijsem.0.006900","DOIUrl":null,"url":null,"abstract":"<p><p>A novel actinobacterium, designated as strain A1-08<sup>T</sup>, was isolated from the volcanic soils of Mt. Mayon, Philippines. Phylogenetic analysis of the 16S rRNA gene sequence revealed that strain A1-08<sup>T</sup> belonged to the genus <i>Streptomyces</i> with sequence similarity with <i>Streptomyces djakartensis</i> NBRC 15409<sup>T</sup> (99.02%), <i>Streptomyces tuirus</i> NBRC 15617<sup>T</sup> (98.88%) and <i>Streptomyces mutabilis</i> NBRC 12800<sup>T</sup> (98.81%). Polyphasic characterization demonstrated distinct morphological, cultural, physiological and biochemical features with unique lipid and fatty acid profiles and respiratory quinones. The major phospholipids of strain A1-08<sup>T</sup> are diphosphatidylglycerol, phosphatidylethanolamine, glycophospholipid with mannose and/or galactose and unidentified lipids such as aminolipid and phospholipid. The major cellular fatty acids were anteiso-C<sub>15 : 0</sub>, C<sub>16 : 0</sub>, anteiso-C<sub>17 : 0</sub>, iso-C<sub>16 : 0</sub>, iso-C<sub>15 : 0</sub> and C<sub>16 : 1</sub> <i>ω</i>7c. The respiratory quinones of the strain include MK-9 (H6), MK-9 (H8), MK-10 (H6) and MK-10 (H8). Multilocus analysis using the concatenated sequences of <i>atpD</i>, <i>gyrB</i>, <i>recA</i>, <i>rpoB</i> and <i>trpB</i> showed that the strain formed a distinct branch in the genus <i>Streptomyces.</i> Potential genes for environmental stress response and adaptation were identified in the genome of strain A1-08<sup>T</sup> and its closest relative strains. Whole-genome sequencing confirmed A1-08<sup>T</sup> as a novel species within <i>Streptomyces</i> with 57.80% digital DNA-DNA hybridization and 93.03% average nt identity value with the closest type strain <i>Streptomyces olivaceus</i> NRRL B-3009<sup>T</sup>. The name <i>Streptomyces mayonensis</i> sp. nov., derived from the Mayon Volcano in the Philippines, is hereby proposed (type strain A1-08<sup>T</sup> =JCM 36345, =DSM 118395).</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":"75 9","pages":""},"PeriodicalIF":2.0000,"publicationDate":"2025-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12401495/pdf/","citationCount":"0","resultStr":"{\"title\":\"<i>Streptomyces mayonensis</i> sp. nov., isolated from the volcanic soils of Mt. Mayon, Philippines.\",\"authors\":\"Gerald M Aguilar, Kristel Mae P Oliveros, Albert Remus R Rosana, Rina B Opulencia, Asuncion K Raymundo\",\"doi\":\"10.1099/ijsem.0.006900\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>A novel actinobacterium, designated as strain A1-08<sup>T</sup>, was isolated from the volcanic soils of Mt. Mayon, Philippines. Phylogenetic analysis of the 16S rRNA gene sequence revealed that strain A1-08<sup>T</sup> belonged to the genus <i>Streptomyces</i> with sequence similarity with <i>Streptomyces djakartensis</i> NBRC 15409<sup>T</sup> (99.02%), <i>Streptomyces tuirus</i> NBRC 15617<sup>T</sup> (98.88%) and <i>Streptomyces mutabilis</i> NBRC 12800<sup>T</sup> (98.81%). Polyphasic characterization demonstrated distinct morphological, cultural, physiological and biochemical features with unique lipid and fatty acid profiles and respiratory quinones. The major phospholipids of strain A1-08<sup>T</sup> are diphosphatidylglycerol, phosphatidylethanolamine, glycophospholipid with mannose and/or galactose and unidentified lipids such as aminolipid and phospholipid. The major cellular fatty acids were anteiso-C<sub>15 : 0</sub>, C<sub>16 : 0</sub>, anteiso-C<sub>17 : 0</sub>, iso-C<sub>16 : 0</sub>, iso-C<sub>15 : 0</sub> and C<sub>16 : 1</sub> <i>ω</i>7c. The respiratory quinones of the strain include MK-9 (H6), MK-9 (H8), MK-10 (H6) and MK-10 (H8). Multilocus analysis using the concatenated sequences of <i>atpD</i>, <i>gyrB</i>, <i>recA</i>, <i>rpoB</i> and <i>trpB</i> showed that the strain formed a distinct branch in the genus <i>Streptomyces.</i> Potential genes for environmental stress response and adaptation were identified in the genome of strain A1-08<sup>T</sup> and its closest relative strains. Whole-genome sequencing confirmed A1-08<sup>T</sup> as a novel species within <i>Streptomyces</i> with 57.80% digital DNA-DNA hybridization and 93.03% average nt identity value with the closest type strain <i>Streptomyces olivaceus</i> NRRL B-3009<sup>T</sup>. The name <i>Streptomyces mayonensis</i> sp. nov., derived from the Mayon Volcano in the Philippines, is hereby proposed (type strain A1-08<sup>T</sup> =JCM 36345, =DSM 118395).</p>\",\"PeriodicalId\":14390,\"journal\":{\"name\":\"International journal of systematic and evolutionary microbiology\",\"volume\":\"75 9\",\"pages\":\"\"},\"PeriodicalIF\":2.0000,\"publicationDate\":\"2025-09-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12401495/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"International journal of systematic and evolutionary microbiology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1099/ijsem.0.006900\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"International journal of systematic and evolutionary microbiology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1099/ijsem.0.006900","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
Streptomyces mayonensis sp. nov., isolated from the volcanic soils of Mt. Mayon, Philippines.
A novel actinobacterium, designated as strain A1-08T, was isolated from the volcanic soils of Mt. Mayon, Philippines. Phylogenetic analysis of the 16S rRNA gene sequence revealed that strain A1-08T belonged to the genus Streptomyces with sequence similarity with Streptomyces djakartensis NBRC 15409T (99.02%), Streptomyces tuirus NBRC 15617T (98.88%) and Streptomyces mutabilis NBRC 12800T (98.81%). Polyphasic characterization demonstrated distinct morphological, cultural, physiological and biochemical features with unique lipid and fatty acid profiles and respiratory quinones. The major phospholipids of strain A1-08T are diphosphatidylglycerol, phosphatidylethanolamine, glycophospholipid with mannose and/or galactose and unidentified lipids such as aminolipid and phospholipid. The major cellular fatty acids were anteiso-C15 : 0, C16 : 0, anteiso-C17 : 0, iso-C16 : 0, iso-C15 : 0 and C16 : 1ω7c. The respiratory quinones of the strain include MK-9 (H6), MK-9 (H8), MK-10 (H6) and MK-10 (H8). Multilocus analysis using the concatenated sequences of atpD, gyrB, recA, rpoB and trpB showed that the strain formed a distinct branch in the genus Streptomyces. Potential genes for environmental stress response and adaptation were identified in the genome of strain A1-08T and its closest relative strains. Whole-genome sequencing confirmed A1-08T as a novel species within Streptomyces with 57.80% digital DNA-DNA hybridization and 93.03% average nt identity value with the closest type strain Streptomyces olivaceus NRRL B-3009T. The name Streptomyces mayonensis sp. nov., derived from the Mayon Volcano in the Philippines, is hereby proposed (type strain A1-08T =JCM 36345, =DSM 118395).
期刊介绍:
Published by the Microbiology Society and owned by the International Committee on Systematics of Prokaryotes (ICSP), a committee of the Bacteriology and Applied Microbiology Division of the International Union of Microbiological Societies, International Journal of Systematic and Evolutionary Microbiology is the leading forum for the publication of novel microbial taxa and the ICSP’s official journal of record for prokaryotic names.
The journal welcomes high-quality research on all aspects of microbial evolution, phylogenetics and systematics, encouraging submissions on all prokaryotes, yeasts, microfungi, protozoa and microalgae across the full breadth of systematics including:
Identification, characterisation and culture preservation
Microbial evolution and biodiversity
Molecular environmental work with strong taxonomic or evolutionary content
Nomenclature
Taxonomy and phylogenetics.