{"title":"通过联合系统生物学方法鉴定与帕金森病和黑色素瘤进展和预后相关的潜在生物标志物。","authors":"Ankita Murmu, Riddhi Upadhyay, Murugan Sevanan, Muthu Kumar Thirunavukkarasu","doi":"10.1002/bab.70036","DOIUrl":null,"url":null,"abstract":"<p><p>Parkinson's disease (PD) and melanoma are considered high risk in affecting an individual's health. The association between PD and melanoma has been reported with consistent results by various epidemiological studies. The identification of differentially expressed genes (DEGs) and pathways between the two diseases can support the findings of the epidemiological studies. Transcriptomics studies play a vital role in investigating DEGs with better specificity and sensitivity. Hence, we have performed transcriptomic data analysis to discover the gene expression profiles and significant pathways and provide insights into the relationship between PD and melanoma. The DEG analysis revealed that genes, such as CLU, glial fibrillary acidic protein (GFAP), and bone morphogenetic protein 6 (BMP6), highly expressed in melanoma, were associated with the progression of PD and genes such as BAG6, heat shock protein family A member 1B (HSPA1B), and ubiquitin-conjugating enzyme E2C (UBE2C), highly expressed in PD, were associated with the progression of melanoma based on evidence from previous studies. Out of the significant common KEGG pathways observed between PD and melanoma, tryptophan metabolism, steroid biosynthesis, peroxisome proliferator-activated receptor (PPAR) signaling and arginine biosynthesis were directly related to the pathogenesis and progression of the two diseases. Therefore, these findings have elucidated the involvement of multiple genes and pathways in the association of PD and melanoma.</p>","PeriodicalId":9274,"journal":{"name":"Biotechnology and applied biochemistry","volume":" ","pages":""},"PeriodicalIF":2.7000,"publicationDate":"2025-08-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Identification of Potential Biomarkers Related to the Progression and Prognosis of Parkinson's Disease and Melanoma via Combined System Biology Approaches.\",\"authors\":\"Ankita Murmu, Riddhi Upadhyay, Murugan Sevanan, Muthu Kumar Thirunavukkarasu\",\"doi\":\"10.1002/bab.70036\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Parkinson's disease (PD) and melanoma are considered high risk in affecting an individual's health. The association between PD and melanoma has been reported with consistent results by various epidemiological studies. The identification of differentially expressed genes (DEGs) and pathways between the two diseases can support the findings of the epidemiological studies. Transcriptomics studies play a vital role in investigating DEGs with better specificity and sensitivity. Hence, we have performed transcriptomic data analysis to discover the gene expression profiles and significant pathways and provide insights into the relationship between PD and melanoma. The DEG analysis revealed that genes, such as CLU, glial fibrillary acidic protein (GFAP), and bone morphogenetic protein 6 (BMP6), highly expressed in melanoma, were associated with the progression of PD and genes such as BAG6, heat shock protein family A member 1B (HSPA1B), and ubiquitin-conjugating enzyme E2C (UBE2C), highly expressed in PD, were associated with the progression of melanoma based on evidence from previous studies. Out of the significant common KEGG pathways observed between PD and melanoma, tryptophan metabolism, steroid biosynthesis, peroxisome proliferator-activated receptor (PPAR) signaling and arginine biosynthesis were directly related to the pathogenesis and progression of the two diseases. Therefore, these findings have elucidated the involvement of multiple genes and pathways in the association of PD and melanoma.</p>\",\"PeriodicalId\":9274,\"journal\":{\"name\":\"Biotechnology and applied biochemistry\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":2.7000,\"publicationDate\":\"2025-08-12\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Biotechnology and applied biochemistry\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://doi.org/10.1002/bab.70036\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biotechnology and applied biochemistry","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.1002/bab.70036","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
Identification of Potential Biomarkers Related to the Progression and Prognosis of Parkinson's Disease and Melanoma via Combined System Biology Approaches.
Parkinson's disease (PD) and melanoma are considered high risk in affecting an individual's health. The association between PD and melanoma has been reported with consistent results by various epidemiological studies. The identification of differentially expressed genes (DEGs) and pathways between the two diseases can support the findings of the epidemiological studies. Transcriptomics studies play a vital role in investigating DEGs with better specificity and sensitivity. Hence, we have performed transcriptomic data analysis to discover the gene expression profiles and significant pathways and provide insights into the relationship between PD and melanoma. The DEG analysis revealed that genes, such as CLU, glial fibrillary acidic protein (GFAP), and bone morphogenetic protein 6 (BMP6), highly expressed in melanoma, were associated with the progression of PD and genes such as BAG6, heat shock protein family A member 1B (HSPA1B), and ubiquitin-conjugating enzyme E2C (UBE2C), highly expressed in PD, were associated with the progression of melanoma based on evidence from previous studies. Out of the significant common KEGG pathways observed between PD and melanoma, tryptophan metabolism, steroid biosynthesis, peroxisome proliferator-activated receptor (PPAR) signaling and arginine biosynthesis were directly related to the pathogenesis and progression of the two diseases. Therefore, these findings have elucidated the involvement of multiple genes and pathways in the association of PD and melanoma.
期刊介绍:
Published since 1979, Biotechnology and Applied Biochemistry is dedicated to the rapid publication of high quality, significant research at the interface between life sciences and their technological exploitation.
The Editors will consider papers for publication based on their novelty and impact as well as their contribution to the advancement of medical biotechnology and industrial biotechnology, covering cutting-edge research in synthetic biology, systems biology, metabolic engineering, bioengineering, biomaterials, biosensing, and nano-biotechnology.