{"title":"鉴定平菇α-淀粉酶基因家族并分析其生长发育过程中的表达","authors":"Xinran Li , Lei Wang , Miao Zhu","doi":"10.1016/j.funbio.2025.101644","DOIUrl":null,"url":null,"abstract":"<div><div>α-Amylase is a crucial enzyme modulating carbohydrate metabolism that holds a significant role in the growth and development of animals, plants, and microbes. However, its role in mushrooms remains unclear. This study identified eight <em>PoAmy</em> genes within the genome of <em>Pleurotus ostreatus</em> that were distributed across three chromosomes. These genes were categorized into two distinct subfamilies based on their phylogenetic relationships and corroborated by the identification of conserved motifs. Gene duplication and homology analyses highlighted that <em>PoAmys</em> have undergone potent purifying selection throughout their evolutionary history. Furthermore, the <em>cis-</em>acting elements within <em>PoAmys</em> indicated heightened sensitivity to light and hormonal regulation. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) annotations suggested that <em>PoAmys</em> were involved in polysaccharide metabolism. Transcriptome data coupled with quantitative real time polymerase chain reaction (qRT-PCR) results indicated that most members exhibited significant differential expression throughout growth and development, from the mycelial stage to the mature substrate. This study provides valuable insights into the role of α-amylase in <em>P. ostreatus</em>, providing a platform for future functional studies.</div></div>","PeriodicalId":12683,"journal":{"name":"Fungal biology","volume":"129 7","pages":"Article 101644"},"PeriodicalIF":3.0000,"publicationDate":"2025-08-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Identifying the Pleurotus ostreatus α-amylase gene family and analyzing its expression during growth and development\",\"authors\":\"Xinran Li , Lei Wang , Miao Zhu\",\"doi\":\"10.1016/j.funbio.2025.101644\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>α-Amylase is a crucial enzyme modulating carbohydrate metabolism that holds a significant role in the growth and development of animals, plants, and microbes. However, its role in mushrooms remains unclear. This study identified eight <em>PoAmy</em> genes within the genome of <em>Pleurotus ostreatus</em> that were distributed across three chromosomes. These genes were categorized into two distinct subfamilies based on their phylogenetic relationships and corroborated by the identification of conserved motifs. Gene duplication and homology analyses highlighted that <em>PoAmys</em> have undergone potent purifying selection throughout their evolutionary history. Furthermore, the <em>cis-</em>acting elements within <em>PoAmys</em> indicated heightened sensitivity to light and hormonal regulation. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) annotations suggested that <em>PoAmys</em> were involved in polysaccharide metabolism. Transcriptome data coupled with quantitative real time polymerase chain reaction (qRT-PCR) results indicated that most members exhibited significant differential expression throughout growth and development, from the mycelial stage to the mature substrate. This study provides valuable insights into the role of α-amylase in <em>P. ostreatus</em>, providing a platform for future functional studies.</div></div>\",\"PeriodicalId\":12683,\"journal\":{\"name\":\"Fungal biology\",\"volume\":\"129 7\",\"pages\":\"Article 101644\"},\"PeriodicalIF\":3.0000,\"publicationDate\":\"2025-08-27\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Fungal biology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S1878614625001102\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"MYCOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Fungal biology","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1878614625001102","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"MYCOLOGY","Score":null,"Total":0}
Identifying the Pleurotus ostreatus α-amylase gene family and analyzing its expression during growth and development
α-Amylase is a crucial enzyme modulating carbohydrate metabolism that holds a significant role in the growth and development of animals, plants, and microbes. However, its role in mushrooms remains unclear. This study identified eight PoAmy genes within the genome of Pleurotus ostreatus that were distributed across three chromosomes. These genes were categorized into two distinct subfamilies based on their phylogenetic relationships and corroborated by the identification of conserved motifs. Gene duplication and homology analyses highlighted that PoAmys have undergone potent purifying selection throughout their evolutionary history. Furthermore, the cis-acting elements within PoAmys indicated heightened sensitivity to light and hormonal regulation. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) annotations suggested that PoAmys were involved in polysaccharide metabolism. Transcriptome data coupled with quantitative real time polymerase chain reaction (qRT-PCR) results indicated that most members exhibited significant differential expression throughout growth and development, from the mycelial stage to the mature substrate. This study provides valuable insights into the role of α-amylase in P. ostreatus, providing a platform for future functional studies.
期刊介绍:
Fungal Biology publishes original contributions in all fields of basic and applied research involving fungi and fungus-like organisms (including oomycetes and slime moulds). Areas of investigation include biodeterioration, biotechnology, cell and developmental biology, ecology, evolution, genetics, geomycology, medical mycology, mutualistic interactions (including lichens and mycorrhizas), physiology, plant pathology, secondary metabolites, and taxonomy and systematics. Submissions on experimental methods are also welcomed. Priority is given to contributions likely to be of interest to a wide international audience.