阐明循环炎症因子与衰老特征之间的因果关系:转录组学和孟德尔随机化分析

IF 4.8 3区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES
Dong Cao, Xuelian Huang, Lifang Luo, Yafang Liu, Jinbei Wen, Le Zeng, Jiachong Han, Junhua Li, Yujuan Li
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引用次数: 0

摘要

慢性炎症在流行病学上与衰老有关,但具体炎症因子的因果作用尚不清楚。我们采用双向孟德尔随机化(Bi‐MR)来评估91种循环炎症蛋白基因与衰老特征之间的因果关系,包括端粒长度、表观遗传时钟、脆弱性、认知功能和健康寿命。因果估计采用反方差加权,采用MR - Egger、加权中位数、贝叶斯加权孟德尔随机化和稳健调整概况评分(MR - RAPS)进行敏感性分析。MRlap评估样品重叠,MR‐PRESSO检测多效性。使用经过CIBERSORT调整的GTEx和GSE236927数据集进行转录组学验证,然后对GSE123697和GSE237029进行加权基因共表达网络分析和独立验证。在错误发现率校正后,12个炎症因子基因呈显著正向相关,10个呈反向相关。值得注意的正向链接包括具有健康跨度的CASP8和具有端粒长度的IL1A和CXCL10。反向MR发现端粒长度是IL10 mRNA水平的因果驱动因素。转录组学分析证实IL10是一个差异表达的、与衰老相关的炎症基因。这项研究提供了遗传和转录组学证据,支持炎症和衰老之间的双向因果关系。il - 10是连接免疫调节和衰老生物学的强有力的候选者。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Elucidating causal relationships between circulating inflammatory factors and aging traits: Transcriptomics and Mendelian randomization analyses
Chronic inflammation is epidemiologically linked to aging, but the causal roles of specific inflammatory factors remain unclear. We performed bidirectional Mendelian randomization (Bi‐MR) to assess causal relationships between 91 circulating inflammatory protein genes and aging traits, including telomere length, epigenetic clocks, frailty, cognitive function, and health span. Causal estimates were derived using inverse‐variance weighted, with MR‐Egger, weighted median, Bayesian weighted Mendelian randomization, and robust adjusted profile score (MR‐RAPS) for sensitivity analysis. MRlap assessed sample overlap, and MR‐PRESSO detected pleiotropy. Transcriptomic validation was performed using GTEx and GSE236927 datasets with CIBERSORT adjustment, followed by weighted gene coexpression network analysis and independent validation in GSE123697 and GSE237029. Twelve inflammatory factor genes showed significant forward associations, and 10 showed reverse associations after false discovery rate correction. Notable forward links included CASP8 with health span and IL1A and CXCL10 with telomere length. Reverse MR identified telomere length as a causal driver of IL10 mRNA levels. Transcriptomic analysis confirmed IL10 as a differentially expressed, aging‐related inflammatory gene. This study provides genetic and transcriptomic evidence supporting bidirectional causal links between inflammation and aging. IL10 emerged as a robust candidate linking immune regulation to aging biology.
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来源期刊
Annals of the New York Academy of Sciences
Annals of the New York Academy of Sciences 综合性期刊-综合性期刊
CiteScore
11.00
自引率
1.90%
发文量
193
审稿时长
2-4 weeks
期刊介绍: Published on behalf of the New York Academy of Sciences, Annals of the New York Academy of Sciences provides multidisciplinary perspectives on research of current scientific interest with far-reaching implications for the wider scientific community and society at large. Each special issue assembles the best thinking of key contributors to a field of investigation at a time when emerging developments offer the promise of new insight. Individually themed, Annals special issues stimulate new ways to think about science by providing a neutral forum for discourse—within and across many institutions and fields.
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