利用机器学习整合多组学数据探索急性肾损伤的新治疗靶点

IF 4.2
Qiming Gong, Yakun Wang, Fahui Liu, Tingting Zhou, Mengqin Tu, Junle Li, Wei Huang, Xu Lin, Wenjuan Sun
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引用次数: 0

摘要

肾缺血再灌注损伤是肾移植不可避免的并发症,目前尚无针对性的治疗干预措施。本研究的目的是探索I/ r诱导的急性肾损伤(I/R-AKI)的分子机制,并发现有效保护肾脏的潜在靶点。利用生物信息学技术分析单细胞水平上调节I/R-AKI的关键基因,并建立诊断模型。此外,还确定了抑制靶基因表达的关键药物,以进行后续的实验验证。采用免疫荧光、western blotting、免疫组织化学和透射电镜观察I/R小鼠和AKI患者肾脏的病理变化。我们开发并验证了I/R-AKI的可靠诊断模型。结果表明ADAMTS1作为肾I/R-AKI的启动子。在I/R-AKI中,ADAMTS1在肾小管上皮细胞中显著上调。此外,线粒体途径介导的细胞凋亡是肾I/R损伤进展的关键因素。在I/R-AKI小鼠模型中,用曲格列酮抑制ADAMTS1可显著降低功能和组织学损伤。该诊断模型可作为诊断I/R-AKI的有效工具。此外,曲格列酮可以通过抑制ADAMTS1的表达来显著促进I/R-AKI的管理。这项研究提供了重要的见解,可能为未来研究肾缺血再灌注损伤的治疗靶点提供信息。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Integrating Multi-Omics Data Using Machine Learning to Explore New Therapeutic Targets for Acute Kidney Injury

Integrating Multi-Omics Data Using Machine Learning to Explore New Therapeutic Targets for Acute Kidney Injury

Renal ischemia–reperfusion (I/R) injury is an unavoidable complication associated with renal transplantation, and currently, there are no targeted therapeutic interventions. The objective of this study was to explore the molecular mechanisms that contribute to I/R-induced acute kidney injury (I/R-AKI) and to discover potential targets for effective renal safeguarding. Bioinformatics techniques were employed to analyse critical genes regulating I/R-AKI at the single-cell level and to develop diagnostic models. Additionally, key pharmacological agents that inhibit the expression of target genes were identified for subsequent experimental validation. Pathological changes in the kidneys of I/R mice and patients with AKI were observed using immunofluorescence, western blotting, immunohistochemistry and transmission electron microscopy. We developed and validated a robust diagnostic model for I/R-AKI. The results suggest that ADAMTS1 acts as a promoter of renal I/R-AKI. In I/R-AKI, ADAMTS1 was significantly upregulated in renal tubular epithelial cells. Furthermore, apoptosis mediated by the mitochondrial pathway was a critical factor in the progression of renal I/R injury. In mouse models of I/R-AKI, the inhibition of ADAMTS1 with troglitazone significantly reduced both functional and histological damage. The diagnostic model can serve as a valuable instrument for diagnosing I/R-AKI. Furthermore, troglitazone can significantly contribute to managing I/R-AKI by inhibiting the expression of ADAMTS1. This study provides critical insights that may inform future research on therapeutic targets for renal ischaemia–reperfusion injury.

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来源期刊
CiteScore
11.50
自引率
0.00%
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期刊介绍: The Journal of Cellular and Molecular Medicine serves as a bridge between physiology and cellular medicine, as well as molecular biology and molecular therapeutics. With a 20-year history, the journal adopts an interdisciplinary approach to showcase innovative discoveries. It publishes research aimed at advancing the collective understanding of the cellular and molecular mechanisms underlying diseases. The journal emphasizes translational studies that translate this knowledge into therapeutic strategies. Being fully open access, the journal is accessible to all readers.
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