综合孟德尔随机化分析确定谵妄的病因血浆蛋白和治疗靶点

IF 3.9 2区 医学 Q1 CLINICAL NEUROLOGY
Ruijinlin Hao , Ningwei Su , Yin Fang , Chaofang Li , Yunfan Li , Hao Cheng , Zhengnian Ding
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引用次数: 0

摘要

本研究旨在利用基于孟德尔随机化(MR)的分析框架和各种生物信息学和基因组学方法,确定谵妄的潜在因果循环蛋白和新的药物靶点。材料和方法采用大规模双样本MR来估计数千种血浆蛋白对谵妄的影响。其他分析包括贝叶斯共定位、Steiger滤波、蛋白质改变变异评估和表达数量性状位点(eQTL)到蛋白质数量性状位点(pQTL)的映射。通过蛋白-蛋白相互作用(PPI)网络、途径富集分析和药物靶点评价来确定谵妄的潜在治疗靶点。结果鉴定出几种血浆蛋白与谵妄有显著的因果关系。贝叶斯共定位证实了这些蛋白质与谵妄相关位点具有共同的遗传结构。Steiger滤波分析验证了因果关系的方向。蛋白质改变变异的评估和eQTL-pQTL定位提供了进一步支持MR发现的证据。PPI网络和通路富集分析揭示了与脑功能和神经炎症相关的关键生物学过程和通路的参与。一些蛋白被确定为潜在的治疗靶点,为预防和治疗谵妄提供了新的途径。结论:本研究确定了几种与谵妄有显著因果关系的血浆蛋白,提示其作为生物标志物和治疗靶点的潜力。我们使用磁共振、共定位和其他生物信息学方法的综合分析加强了这些关联的证据。这些发现增强了我们对谵妄的分子机制的理解,并强调了新的干预目标,这可能导致改善这种情况的预防和治疗策略。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Integrative Mendelian randomization analysis to identify causal plasma proteins and therapeutic targets for delirium

Introduction

This study aims to identify potentially causal circulating proteins and novel drug targets for delirium using a Mendelian randomization (MR)-based analytical framework and various bioinformatics and genomics methods.

Material and methods

Large-scale two-sample MR was employed to estimate the effects of thousands of plasma proteins on delirium. Additional analysis included Bayesian Colocalization, Steiger filtering, protein-altering variant assessment, and mapping of expression quantitative trait loci (eQTL) to protein quantitative trait loci (pQTL). Protein-protein interaction (PPI) networks, pathway enrichment analysis, and evaluation of drug targets were conducted to identify potential therapeutic targets for delirium.

Results

Several plasma proteins were identified that show significant causal effects on delirium. Bayesian Colocalization confirmed that these proteins share a common genetic architecture with delirium-associated loci. Steiger filtering analysis validated the direction of causality. Assessment of protein-altering variants and eQTL-pQTL mapping provided further evidence supporting the MR findings. PPI networks and pathway enrichment analysis revealed involvement in key biological processes and pathways related to brain function and neuroinflammation. Several proteins were identified as potential therapeutic targets, offering new avenues for prevention and treatment of delirium.

Conclusions

This study identifies several plasma proteins that have a significant causal relationship with delirium, suggesting their potential as biomarkers and therapeutic targets. Our comprehensive analysis using MR, Colocalization, and other bioinformatics approaches strengthens the evidence for these associations. The findings enhance our understanding of the molecular mechanisms underlying delirium and highlight new targets for intervention, which could lead to improved prevention and treatment strategies for this condition.
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来源期刊
CiteScore
12.00
自引率
1.80%
发文量
153
审稿时长
56 days
期刊介绍: Progress in Neuro-Psychopharmacology & Biological Psychiatry is an international and multidisciplinary journal which aims to ensure the rapid publication of authoritative reviews and research papers dealing with experimental and clinical aspects of neuro-psychopharmacology and biological psychiatry. Issues of the journal are regularly devoted wholly in or in part to a topical subject. Progress in Neuro-Psychopharmacology & Biological Psychiatry does not publish work on the actions of biological extracts unless the pharmacological active molecular substrate and/or specific receptor binding properties of the extract compounds are elucidated.
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