Ying Wu, Li-Hui Shao, Xian-Qun Hu, Yu Long, Yuan-Yuan Wu, Pei-Bu Yu, Ai-Ping Yan, Long-Fei Li, Xiang Zhou, Song Yang
{"title":"通过膜靶向机制发现吲哚-碳酰肼杂交种作为新型广谱杀真菌先导化合物。","authors":"Ying Wu, Li-Hui Shao, Xian-Qun Hu, Yu Long, Yuan-Yuan Wu, Pei-Bu Yu, Ai-Ping Yan, Long-Fei Li, Xiang Zhou, Song Yang","doi":"10.1007/s11030-025-11326-z","DOIUrl":null,"url":null,"abstract":"<p><p>The escalating prevalence of fungicide resistance has severely diminished the effectiveness of conventional antifungal agents, creating substantial challenges for fungal infection control. To combat this emerging threat, we rationally designed a series of indole-carbohydrazide hybrids, aiming to develop novel membrane-targeting antifungal agents. Of particular note, compound b6 demonstrated optimal antifungal efficacy against Colletotrichum fructicola (C. f., EC<sub>50</sub> = 3.39 μg/mL) and Gibberella zeae (G. z., EC<sub>50</sub> = 3.49 μg/mL). Comprehensive mechanistic investigations employing multiple approaches-including scanning electron microscopy (SEM), propidium iodide (PI) permeability assays, extracellular conductivity monitoring, and cytoplasmic leakage analysis-collectively revealed that b6 compromised fungal membrane integrity, leading to irreversible cellular damage via increased membrane permeability. Molecular electrostatic potential (MEP) mapping further corroborated the compound's optimal electronic properties for membrane interactions. Comprehensive ADMET analysis demonstrated favorable pharmacokinetic properties, complemented by toxicological evaluations showing exceptional biocompatibility: zebrafish models exhibited a 96-h LC<sub>50</sub> > 10 μg/mL, while cytotoxicity assays revealed low toxicity toward various human cell lines. This collective safety profile underscores b6's agricultural applicability. Furthermore, potted plant experiments revealed that compound b6 (200 μg/mL) exhibited protective and curative efficacies of 47.33 and 40.94% against C. f., respectively; these values were comparable or superior to those of the commercial fungicide chlorothalonil. Overall, these findings collectively identified b6 as a promising structural scaffold for developing new antifungal agent alternative, offering significant advantages through its unique membrane-targeting mechanism and synthetic accessibility.</p>","PeriodicalId":708,"journal":{"name":"Molecular Diversity","volume":" ","pages":""},"PeriodicalIF":3.8000,"publicationDate":"2025-08-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Discovery of indole-carbohydrazide hybrids as novel broad-spectrum fungicidal lead compound though membrane-targeting mechanism.\",\"authors\":\"Ying Wu, Li-Hui Shao, Xian-Qun Hu, Yu Long, Yuan-Yuan Wu, Pei-Bu Yu, Ai-Ping Yan, Long-Fei Li, Xiang Zhou, Song Yang\",\"doi\":\"10.1007/s11030-025-11326-z\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>The escalating prevalence of fungicide resistance has severely diminished the effectiveness of conventional antifungal agents, creating substantial challenges for fungal infection control. To combat this emerging threat, we rationally designed a series of indole-carbohydrazide hybrids, aiming to develop novel membrane-targeting antifungal agents. Of particular note, compound b6 demonstrated optimal antifungal efficacy against Colletotrichum fructicola (C. f., EC<sub>50</sub> = 3.39 μg/mL) and Gibberella zeae (G. z., EC<sub>50</sub> = 3.49 μg/mL). Comprehensive mechanistic investigations employing multiple approaches-including scanning electron microscopy (SEM), propidium iodide (PI) permeability assays, extracellular conductivity monitoring, and cytoplasmic leakage analysis-collectively revealed that b6 compromised fungal membrane integrity, leading to irreversible cellular damage via increased membrane permeability. Molecular electrostatic potential (MEP) mapping further corroborated the compound's optimal electronic properties for membrane interactions. Comprehensive ADMET analysis demonstrated favorable pharmacokinetic properties, complemented by toxicological evaluations showing exceptional biocompatibility: zebrafish models exhibited a 96-h LC<sub>50</sub> > 10 μg/mL, while cytotoxicity assays revealed low toxicity toward various human cell lines. This collective safety profile underscores b6's agricultural applicability. Furthermore, potted plant experiments revealed that compound b6 (200 μg/mL) exhibited protective and curative efficacies of 47.33 and 40.94% against C. f., respectively; these values were comparable or superior to those of the commercial fungicide chlorothalonil. Overall, these findings collectively identified b6 as a promising structural scaffold for developing new antifungal agent alternative, offering significant advantages through its unique membrane-targeting mechanism and synthetic accessibility.</p>\",\"PeriodicalId\":708,\"journal\":{\"name\":\"Molecular Diversity\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":3.8000,\"publicationDate\":\"2025-08-19\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Molecular Diversity\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://doi.org/10.1007/s11030-025-11326-z\",\"RegionNum\":2,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"CHEMISTRY, APPLIED\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Molecular Diversity","FirstCategoryId":"92","ListUrlMain":"https://doi.org/10.1007/s11030-025-11326-z","RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, APPLIED","Score":null,"Total":0}
Discovery of indole-carbohydrazide hybrids as novel broad-spectrum fungicidal lead compound though membrane-targeting mechanism.
The escalating prevalence of fungicide resistance has severely diminished the effectiveness of conventional antifungal agents, creating substantial challenges for fungal infection control. To combat this emerging threat, we rationally designed a series of indole-carbohydrazide hybrids, aiming to develop novel membrane-targeting antifungal agents. Of particular note, compound b6 demonstrated optimal antifungal efficacy against Colletotrichum fructicola (C. f., EC50 = 3.39 μg/mL) and Gibberella zeae (G. z., EC50 = 3.49 μg/mL). Comprehensive mechanistic investigations employing multiple approaches-including scanning electron microscopy (SEM), propidium iodide (PI) permeability assays, extracellular conductivity monitoring, and cytoplasmic leakage analysis-collectively revealed that b6 compromised fungal membrane integrity, leading to irreversible cellular damage via increased membrane permeability. Molecular electrostatic potential (MEP) mapping further corroborated the compound's optimal electronic properties for membrane interactions. Comprehensive ADMET analysis demonstrated favorable pharmacokinetic properties, complemented by toxicological evaluations showing exceptional biocompatibility: zebrafish models exhibited a 96-h LC50 > 10 μg/mL, while cytotoxicity assays revealed low toxicity toward various human cell lines. This collective safety profile underscores b6's agricultural applicability. Furthermore, potted plant experiments revealed that compound b6 (200 μg/mL) exhibited protective and curative efficacies of 47.33 and 40.94% against C. f., respectively; these values were comparable or superior to those of the commercial fungicide chlorothalonil. Overall, these findings collectively identified b6 as a promising structural scaffold for developing new antifungal agent alternative, offering significant advantages through its unique membrane-targeting mechanism and synthetic accessibility.
期刊介绍:
Molecular Diversity is a new publication forum for the rapid publication of refereed papers dedicated to describing the development, application and theory of molecular diversity and combinatorial chemistry in basic and applied research and drug discovery. The journal publishes both short and full papers, perspectives, news and reviews dealing with all aspects of the generation of molecular diversity, application of diversity for screening against alternative targets of all types (biological, biophysical, technological), analysis of results obtained and their application in various scientific disciplines/approaches including:
combinatorial chemistry and parallel synthesis;
small molecule libraries;
microwave synthesis;
flow synthesis;
fluorous synthesis;
diversity oriented synthesis (DOS);
nanoreactors;
click chemistry;
multiplex technologies;
fragment- and ligand-based design;
structure/function/SAR;
computational chemistry and molecular design;
chemoinformatics;
screening techniques and screening interfaces;
analytical and purification methods;
robotics, automation and miniaturization;
targeted libraries;
display libraries;
peptides and peptoids;
proteins;
oligonucleotides;
carbohydrates;
natural diversity;
new methods of library formulation and deconvolution;
directed evolution, origin of life and recombination;
search techniques, landscapes, random chemistry and more;