{"title":"缓冲离子浓度变化和突变对GH1 β-葡萄糖苷酶同型二聚体的影响","authors":"Rafael S. Chagas, and , Sandro R. Marana*, ","doi":"10.1021/acsomega.5c03396","DOIUrl":null,"url":null,"abstract":"<p >Oligomerization is a key feature of protein function, with approximately 30% of proteins exhibiting this trait. The homodimeric form of proteins, such as the GH1 β-glucosidase from <i>Spodoptera frugiperda</i> (Sfβgly), plays a significant role in enzyme activity. In this study, we investigate the homodimerization of Sfβgly, which forms a cyclic C2 dimer with a well-defined interface. Using size exclusion chromatography and SEC-MALS, we characterized the homodimerization behavior of Sfβgly at equilibrium conditions in different ionic concentrations of phosphate buffer. The dissociation constants (<i>K</i><sub>D</sub>) increase with decreasing ionic concentration, suggesting that the hydrophobic effect is central to homodimer formation. Site-directed mutagenesis of key residues at the dimer interface further elucidated the contributions of specific amino acid residues to dimer stability. Mutations affecting both, apolar and hydrogen bond-forming residues, significantly increased the <i>K</i><sub>D</sub>. However, mutations of hydrogen bond-forming residues caused a smaller <i>K</i><sub>D</sub> change than apolar residue mutations, suggesting that while the latter is the driving factor in the dimerization, the former could play a role in guiding the monomers relative orientation. These findings enhance our understanding of protein oligomerization in GH1 β-glucosidases and its implications for protein design and function.</p>","PeriodicalId":22,"journal":{"name":"ACS Omega","volume":"10 32","pages":"35965–35974"},"PeriodicalIF":4.3000,"publicationDate":"2025-08-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://pubs.acs.org/doi/pdf/10.1021/acsomega.5c03396","citationCount":"0","resultStr":"{\"title\":\"Impact of Changes in Buffer Ionic Concentration and Mutations on a GH1 β-Glucosidase Homodimer\",\"authors\":\"Rafael S. Chagas, and , Sandro R. Marana*, \",\"doi\":\"10.1021/acsomega.5c03396\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p >Oligomerization is a key feature of protein function, with approximately 30% of proteins exhibiting this trait. The homodimeric form of proteins, such as the GH1 β-glucosidase from <i>Spodoptera frugiperda</i> (Sfβgly), plays a significant role in enzyme activity. In this study, we investigate the homodimerization of Sfβgly, which forms a cyclic C2 dimer with a well-defined interface. Using size exclusion chromatography and SEC-MALS, we characterized the homodimerization behavior of Sfβgly at equilibrium conditions in different ionic concentrations of phosphate buffer. The dissociation constants (<i>K</i><sub>D</sub>) increase with decreasing ionic concentration, suggesting that the hydrophobic effect is central to homodimer formation. Site-directed mutagenesis of key residues at the dimer interface further elucidated the contributions of specific amino acid residues to dimer stability. Mutations affecting both, apolar and hydrogen bond-forming residues, significantly increased the <i>K</i><sub>D</sub>. However, mutations of hydrogen bond-forming residues caused a smaller <i>K</i><sub>D</sub> change than apolar residue mutations, suggesting that while the latter is the driving factor in the dimerization, the former could play a role in guiding the monomers relative orientation. These findings enhance our understanding of protein oligomerization in GH1 β-glucosidases and its implications for protein design and function.</p>\",\"PeriodicalId\":22,\"journal\":{\"name\":\"ACS Omega\",\"volume\":\"10 32\",\"pages\":\"35965–35974\"},\"PeriodicalIF\":4.3000,\"publicationDate\":\"2025-08-06\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://pubs.acs.org/doi/pdf/10.1021/acsomega.5c03396\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"ACS Omega\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://pubs.acs.org/doi/10.1021/acsomega.5c03396\",\"RegionNum\":3,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"CHEMISTRY, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"ACS Omega","FirstCategoryId":"92","ListUrlMain":"https://pubs.acs.org/doi/10.1021/acsomega.5c03396","RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
Impact of Changes in Buffer Ionic Concentration and Mutations on a GH1 β-Glucosidase Homodimer
Oligomerization is a key feature of protein function, with approximately 30% of proteins exhibiting this trait. The homodimeric form of proteins, such as the GH1 β-glucosidase from Spodoptera frugiperda (Sfβgly), plays a significant role in enzyme activity. In this study, we investigate the homodimerization of Sfβgly, which forms a cyclic C2 dimer with a well-defined interface. Using size exclusion chromatography and SEC-MALS, we characterized the homodimerization behavior of Sfβgly at equilibrium conditions in different ionic concentrations of phosphate buffer. The dissociation constants (KD) increase with decreasing ionic concentration, suggesting that the hydrophobic effect is central to homodimer formation. Site-directed mutagenesis of key residues at the dimer interface further elucidated the contributions of specific amino acid residues to dimer stability. Mutations affecting both, apolar and hydrogen bond-forming residues, significantly increased the KD. However, mutations of hydrogen bond-forming residues caused a smaller KD change than apolar residue mutations, suggesting that while the latter is the driving factor in the dimerization, the former could play a role in guiding the monomers relative orientation. These findings enhance our understanding of protein oligomerization in GH1 β-glucosidases and its implications for protein design and function.
ACS OmegaChemical Engineering-General Chemical Engineering
CiteScore
6.60
自引率
4.90%
发文量
3945
审稿时长
2.4 months
期刊介绍:
ACS Omega is an open-access global publication for scientific articles that describe new findings in chemistry and interfacing areas of science, without any perceived evaluation of immediate impact.