Xinmin Li, Long Chen, Hongbo Yu, Le Xiong, Wenxiang Song, Xiang Li, Guixia Liu, Weihua Li and Yun Tang*,
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CLaSP: A Contrastive Learning-Guided Latent Scoring Platform for Comprehensive Drug-Likeness Evaluation
Efficient drug-likeness evaluation is critical for accelerating drug discovery and reducing the costs of early stage compound screening. However, existing approaches either rely on rigid empirical rules or supervised classification models, which lack generalizability and interpretability. Here we introduce contrastive learning–guided latent scoring platform (CLaSP), a novel framework that integrates variational autoencoding with triplet contrastive learning for drug-likeness assessment. CLaSP constructs a structured latent space informed by both physicochemical and ADMET-related features, enabling a continuous, interpretable CLaSP_Score that reflects molecular developability. The feature set was curated from ADMETlab 3.0 and admetSAR 3.0 and refined via feature selection. Benchmark evaluations demonstrated that CLaSP outperformed QED and DBPP-Predictor across multiple data sets and real-world case studies. Furthermore, CLaSP effectively captured drug optimization trajectories, as shown in a case study of Wee1 inhibitors. A user-friendly web portal (https://lmmd.ecust.edu.cn/CLaSP) supports single and batch analyses for early drug design.
期刊介绍:
The Journal of Medicinal Chemistry is a prestigious biweekly peer-reviewed publication that focuses on the multifaceted field of medicinal chemistry. Since its inception in 1959 as the Journal of Medicinal and Pharmaceutical Chemistry, it has evolved to become a cornerstone in the dissemination of research findings related to the design, synthesis, and development of therapeutic agents.
The Journal of Medicinal Chemistry is recognized for its significant impact in the scientific community, as evidenced by its 2022 impact factor of 7.3. This metric reflects the journal's influence and the importance of its content in shaping the future of drug discovery and development. The journal serves as a vital resource for chemists, pharmacologists, and other researchers interested in the molecular mechanisms of drug action and the optimization of therapeutic compounds.