沙眼衣原体含SWIB结构域的DNA拓扑异构酶I介导DNA松弛。

IF 3 3区 生物学 Q3 MICROBIOLOGY
Journal of Bacteriology Pub Date : 2025-09-18 Epub Date: 2025-08-12 DOI:10.1128/jb.00190-25
Li Shen, Abigail R Swoboda, Caitlynn Diggs, Shomita Ferdous, Andrew Terrebonne, Amanda Santos, Noel Wolf, Luis Lorenzo Carvajal, Guangming Zhong, Scot P Ouellette, Yuk-Ching Tse-Dinh
{"title":"沙眼衣原体含SWIB结构域的DNA拓扑异构酶I介导DNA松弛。","authors":"Li Shen, Abigail R Swoboda, Caitlynn Diggs, Shomita Ferdous, Andrew Terrebonne, Amanda Santos, Noel Wolf, Luis Lorenzo Carvajal, Guangming Zhong, Scot P Ouellette, Yuk-Ching Tse-Dinh","doi":"10.1128/jb.00190-25","DOIUrl":null,"url":null,"abstract":"<p><p><i>Chlamydia trachomatis</i> has a DNA topoisomerase I with a unique C-terminal domain (CTD) homologous to eukaryotic SWIB domains. This study focused on determining the function of the SWIB domain-containing TopA from <i>C. trachomatis</i> (CtTopA). We demonstrated that, despite the lack of sequence similarity at the CTDs between CtTopA and TopA from <i>Escherichia coli</i> (EcTopA), full-length CtTopA removed negative DNA supercoils <i>in vitro</i> and complemented the growth defect of a <i>topA</i> mutant of <i>E. coli</i>. CtTopA is less processive in DNA relaxation than EcTopA in dose-response and time course studies. An antibody generated against the SWIB domain of CtTopA specifically recognized CtTopA but not EcTopA or <i>Mycobacterium tuberculosis</i> TopA, consistent with the sequence differences in their CTDs. The endogenous CtTopA protein is expressed at a relatively high level during the middle and late developmental stages of <i>C. trachomatis</i>. Overexpressing a <i>topA</i> mutant allele lacking the SWIB domain in <i>C. trachomatis</i> resulted in slow growth when host protein synthesis was inhibited. These data suggest that productive infection of <i>C. trachomatis</i> requires functional SWIB domain-containing CtTopA and <i>de novo</i> host protein synthesis. Because SWIB domain-containing CtTopAs are not found in prokaryotes beyond <i>Chlamydia</i> spp., our work suggests an important function of the SWIB domain on CtTopA activity during <i>C. trachomatis</i> infection.IMPORTANCE<i>Chlamydia trachomatis</i> is a medically important bacterial pathogen that is responsible for the most prevalent bacterial sexually transmitted infection. Bioinformatics, genetics, and biochemical analyses have established that the presence of a SWIB domain in CtTopA is relevant to chlamydial physiology. Our findings also underline the mechanistic diversity among the family of TopAs that are likely driven by pathogen-specific adaptations.</p>","PeriodicalId":15107,"journal":{"name":"Journal of Bacteriology","volume":" ","pages":"e0019025"},"PeriodicalIF":3.0000,"publicationDate":"2025-09-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12445093/pdf/","citationCount":"0","resultStr":"{\"title\":\"The SWIB domain-containing DNA topoisomerase I of <i>Chlamydia trachomatis</i> mediates DNA relaxation.\",\"authors\":\"Li Shen, Abigail R Swoboda, Caitlynn Diggs, Shomita Ferdous, Andrew Terrebonne, Amanda Santos, Noel Wolf, Luis Lorenzo Carvajal, Guangming Zhong, Scot P Ouellette, Yuk-Ching Tse-Dinh\",\"doi\":\"10.1128/jb.00190-25\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p><i>Chlamydia trachomatis</i> has a DNA topoisomerase I with a unique C-terminal domain (CTD) homologous to eukaryotic SWIB domains. This study focused on determining the function of the SWIB domain-containing TopA from <i>C. trachomatis</i> (CtTopA). We demonstrated that, despite the lack of sequence similarity at the CTDs between CtTopA and TopA from <i>Escherichia coli</i> (EcTopA), full-length CtTopA removed negative DNA supercoils <i>in vitro</i> and complemented the growth defect of a <i>topA</i> mutant of <i>E. coli</i>. CtTopA is less processive in DNA relaxation than EcTopA in dose-response and time course studies. An antibody generated against the SWIB domain of CtTopA specifically recognized CtTopA but not EcTopA or <i>Mycobacterium tuberculosis</i> TopA, consistent with the sequence differences in their CTDs. The endogenous CtTopA protein is expressed at a relatively high level during the middle and late developmental stages of <i>C. trachomatis</i>. Overexpressing a <i>topA</i> mutant allele lacking the SWIB domain in <i>C. trachomatis</i> resulted in slow growth when host protein synthesis was inhibited. These data suggest that productive infection of <i>C. trachomatis</i> requires functional SWIB domain-containing CtTopA and <i>de novo</i> host protein synthesis. Because SWIB domain-containing CtTopAs are not found in prokaryotes beyond <i>Chlamydia</i> spp., our work suggests an important function of the SWIB domain on CtTopA activity during <i>C. trachomatis</i> infection.IMPORTANCE<i>Chlamydia trachomatis</i> is a medically important bacterial pathogen that is responsible for the most prevalent bacterial sexually transmitted infection. Bioinformatics, genetics, and biochemical analyses have established that the presence of a SWIB domain in CtTopA is relevant to chlamydial physiology. Our findings also underline the mechanistic diversity among the family of TopAs that are likely driven by pathogen-specific adaptations.</p>\",\"PeriodicalId\":15107,\"journal\":{\"name\":\"Journal of Bacteriology\",\"volume\":\" \",\"pages\":\"e0019025\"},\"PeriodicalIF\":3.0000,\"publicationDate\":\"2025-09-18\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12445093/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Bacteriology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1128/jb.00190-25\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2025/8/12 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q3\",\"JCRName\":\"MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Bacteriology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1128/jb.00190-25","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/8/12 0:00:00","PubModel":"Epub","JCR":"Q3","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

沙眼衣原体的DNA拓扑异构酶I具有独特的c端结构域(CTD),与真核生物SWIB结构域同源。本研究旨在确定沙眼衣原体中含有SWIB结构域的TopA (CtTopA)的功能。我们证明,尽管来自大肠杆菌(EcTopA)的CtTopA和TopA在CTDs上缺乏序列相似性,但全长CtTopA在体外去除了负DNA超圈,并弥补了大肠杆菌TopA突变体的生长缺陷。在剂量反应和时间过程研究中,CtTopA比EcTopA在DNA弛豫中的进展性更弱。针对CtTopA的SWIB结构域产生的抗体特异性识别CtTopA,但不能识别EcTopA或结核分枝杆菌TopA,这与它们的CTDs序列差异一致。内源性CtTopA蛋白在沙眼衣原体发育中后期表达水平较高。当宿主蛋白合成受到抑制时,沙眼衣原体中缺乏SWIB结构域的topA突变等位基因过表达会导致生长缓慢。这些数据表明,沙眼衣原体的生产性感染需要功能SWIB结构域的CtTopA和新生宿主蛋白合成。由于在衣原体以外的原核生物中没有发现含有SWIB结构域的CtTopA,因此我们的研究表明,在沙眼衣原体感染过程中,SWIB结构域对CtTopA活性具有重要作用。重要性沙眼衣原体是医学上重要的细菌病原体,是最普遍的细菌性传播感染的原因。生物信息学、遗传学和生化分析已经证实,CtTopA中SWIB结构域的存在与衣原体生理学有关。我们的发现还强调了topa家族的机制多样性,这可能是由病原体特异性适应驱动的。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
The SWIB domain-containing DNA topoisomerase I of Chlamydia trachomatis mediates DNA relaxation.

Chlamydia trachomatis has a DNA topoisomerase I with a unique C-terminal domain (CTD) homologous to eukaryotic SWIB domains. This study focused on determining the function of the SWIB domain-containing TopA from C. trachomatis (CtTopA). We demonstrated that, despite the lack of sequence similarity at the CTDs between CtTopA and TopA from Escherichia coli (EcTopA), full-length CtTopA removed negative DNA supercoils in vitro and complemented the growth defect of a topA mutant of E. coli. CtTopA is less processive in DNA relaxation than EcTopA in dose-response and time course studies. An antibody generated against the SWIB domain of CtTopA specifically recognized CtTopA but not EcTopA or Mycobacterium tuberculosis TopA, consistent with the sequence differences in their CTDs. The endogenous CtTopA protein is expressed at a relatively high level during the middle and late developmental stages of C. trachomatis. Overexpressing a topA mutant allele lacking the SWIB domain in C. trachomatis resulted in slow growth when host protein synthesis was inhibited. These data suggest that productive infection of C. trachomatis requires functional SWIB domain-containing CtTopA and de novo host protein synthesis. Because SWIB domain-containing CtTopAs are not found in prokaryotes beyond Chlamydia spp., our work suggests an important function of the SWIB domain on CtTopA activity during C. trachomatis infection.IMPORTANCEChlamydia trachomatis is a medically important bacterial pathogen that is responsible for the most prevalent bacterial sexually transmitted infection. Bioinformatics, genetics, and biochemical analyses have established that the presence of a SWIB domain in CtTopA is relevant to chlamydial physiology. Our findings also underline the mechanistic diversity among the family of TopAs that are likely driven by pathogen-specific adaptations.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Journal of Bacteriology
Journal of Bacteriology 生物-微生物学
CiteScore
6.10
自引率
9.40%
发文量
324
审稿时长
1.3 months
期刊介绍: The Journal of Bacteriology (JB) publishes research articles that probe fundamental processes in bacteria, archaea and their viruses, and the molecular mechanisms by which they interact with each other and with their hosts and their environments.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信